Gene Cphy_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2725 
SymbolnrdR 
ID5743018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3315035 
End bp3315496 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content36% 
IMG OID641293817 
Producttranscriptional regulator NrdR 
Protein accessionYP_001559825 
Protein GI160880857 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000561851 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGTC CATTTTGTGG AAAAGAAAAT ACAAGAGTAA TTGACTCAAG GCCAGCAGAT 
GATTGCAGTT CAATACGACG CAGAAGACAG TGTGATGAAT GTTCTAAACG TTTTACTACT 
TATGAAAAAG TAGAAACGAT ACCTTTGGTG GTAATTAAGA AGGATAATAA TCGTGAACCT 
TACGATCGTT CCAAAATTGA AGCAGGTGTG TTTCGTTCCT GCCATAAGCG CCCGATTTCC 
GTAGATCAGA TTAACGCACT CGTTGATGAA GTGGAAAACA CTATTTTTAA TTTGGAAGAA 
AAAGAAGTTC CAAGTAATAA AATCGGTGAA ATTGTGATGG ATAAGCTAAA GAGCTTAGAT 
GCTGTTGCTT ATGTTCGATT TGCTTCCGTT TATCGTGAAT TTAAGGATGT CAATACCTTT 
ATGAACGAAC TAAAGAAGAT ACTCGATCAT GAACATGTTT AA
 
Protein sequence
MKCPFCGKEN TRVIDSRPAD DCSSIRRRRQ CDECSKRFTT YEKVETIPLV VIKKDNNREP 
YDRSKIEAGV FRSCHKRPIS VDQINALVDE VENTIFNLEE KEVPSNKIGE IVMDKLKSLD 
AVAYVRFASV YREFKDVNTF MNELKKILDH EHV