Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2721 |
Symbol | |
ID | 5743014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3307916 |
End bp | 3308683 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293813 |
Product | transcriptional repressor CodY |
Protein accession | YP_001559821 |
Protein GI | 160880853 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000105427 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAC AATTGTTGGA TAAAACCAGA AAAATTAATA AGTTATTGCA CAATAATAAC TCACACAAGG TAGTATTTAA TGATATTTGT TCCGTACTTA GTGACATTTT AGAGTCCAAT ATTCTTGTGA TTAGCAAGAA GGGAAAAGTA CTAGGAATTA AAAACAGAAC GGATATTACT CCAATCAGTG AATTGATCAA AGATTCAGTA GGTGGCTACA TCGACGGTAT GTTGAATGAA CGTCTACTCA ACATTTTATC AACAAAAGAA AATGTAAATT TAGCAACCTT AGGTTTTGAA TTTGACGGTG TGAATGATTA TCAGGCAATT ATTACACCAA TCGACATCGC CGGTGAGAGA CTTGGAACCT TGTTCTTATA TAAGAACAAA GACCAATATT CAATTGACGA CATAATTTTA AGTGAGTATG GTACTACTGT AGTAGGGCTT GAGATGATGC GTTCCGTGAA TGAAGAAAAT GCGGAAGAAA ACAGAAAGGT ACATATTGTA CGATCTGCGA TTAGCACACT TTCTTTCTCT GAATTGGAAG CGATCACTCA TATATTTGAT GAACTAGAAG GAAATGAAGG TATCTTAGTT GCCAGCAAGA TTGCAGACCG TGTAGGTATT ACAAGATCTG TTATTGTGAA TGCACTTAGA AAATTTGAGA GTGCAGGCGT TATTGAATCC AGATCTTCTG GTATGAAGGG AACTTATATT AAAGTTCTCA ATGATGTAGT TTTTGATGAA TTAAAAAAGA TGCAATAA
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Protein sequence | MSVQLLDKTR KINKLLHNNN SHKVVFNDIC SVLSDILESN ILVISKKGKV LGIKNRTDIT PISELIKDSV GGYIDGMLNE RLLNILSTKE NVNLATLGFE FDGVNDYQAI ITPIDIAGER LGTLFLYKNK DQYSIDDIIL SEYGTTVVGL EMMRSVNEEN AEENRKVHIV RSAISTLSFS ELEAITHIFD ELEGNEGILV ASKIADRVGI TRSVIVNALR KFESAGVIES RSSGMKGTYI KVLNDVVFDE LKKMQ
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