Gene Cphy_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2708 
Symbol 
ID5743001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3295110 
End bp3296549 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content38% 
IMG OID641293800 
Producthypothetical protein 
Protein accessionYP_001559808 
Protein GI160880840 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAT CATTATATTC TGGTGTATCA GGACTTAGAG TTCACCAGAC CAAGATGGAC 
GTTATTGGTA ATAATATATC AAACGTTAAC ACAGTAGGCT TTAAAGCAAG TTCTGCAACA
TTTTCTGATA TTTTATATCA GACAACCAAA AGTGCTTCTG GTCCTAACCC AAATACTGGA
ACAGCTGGTA CAAACGCAAT GCAGATTGGA CTTGGTGCAA ATCTTGCATC CATTACAGCA
AGCATTACAA AAACCGGTGG TTCTCAAAGA ACAGACAATC CTTTCGATTT GATGATTGAG
GGAGATGGTT TCTTTGTAGT AAATAACGGT GTAGGTAACT TTTTTACCAA AGCAGGTTCT
TTTAACGTAG ATGCAGCAGG TACTTTATGT ACACCAACTG GTGCAACCGT AATGGGATGG
CAGCCAAGTA GAGAGGATCC AAGAAAGACG GTACCAGGTT CAGTTTCACC GCTTCGTATT
ATGTCGCCGG AGAATCTTTA TTCTGCACCA GAAGCTACCA CTGATATCTA TCTTCACGGA
AACATCGATA GTATGGATAC AAACCTAACA TCATCGACAG GACGTATTGT GAACATGTCT
TTCTTTGATA ATTTAGGTAA TAGCTACACT GCAGAAGTTA AGATCAAGCA AAGTGAAGAT
TCTAAGAGTG ATTATAAGGT GACCATTCAA AATATCTATG ATAAAAAAGG TGATTCTATC
TTCGCTAAGA AAGTAGTTGA TCCAGACACT GGTGATATTA CATACGAGGC TTCAAACATT
ACAGACTTTA ATTTTGGTAA TGGTACTGGT TCTGTCACAG TTAATGATGA TGGAACGATA
GAAGTAGATT GTGATGAAAT CGACCTTAAA TTCAATGGTG CAAATGGTAA CTTCGTTAGC
GTAGGTGATG ATGCAGACAA TGCTACCAGC ATTAAGTTTA AGGTAAATGC TGATCCTGAC
CCATTTAAGG ATGTTAATAT TGATTTCTCT TCCATTACTA TGTACAACAA CAGTGGTACA
ACAACAGTAG AGTCCACTAA GGGAGCAAAA GCTGATGGAA CTGGTGCAGG TAAGGCAGCT
GGTAATATGT CAGGTATTTC TATTGACCAA CAGGGTATGA TTTTTGGTAC TTATGACAAT
GGAGACCGTA AATTACTAGG ACAAGTTGTT GTTGCAACAT TCTCTAATCC AGCTGGATTA
GAAGCGATAG GAAATAATAT GTTCTCTGCA ACACCAAACT CTGGAGAATT TAACGGTGTT
GGTGAGGACA TCACATCATC CGGTGGTAAG TTCATAACAG GTGTACTTGA AATGTCGAAC
GTTGACCTTT CACAGCAATT TACAGAAATG ATAACAACAC AAAGAGGTTT CCAGGCAAAT
TCAAGAATAA TAACAACCTC AGATACCCTT CTAGAGGAGT TAATTAATTT GAAGAGATAA
 
Protein sequence
MMRSLYSGVS GLRVHQTKMD VIGNNISNVN TVGFKASSAT FSDILYQTTK SASGPNPNTG 
TAGTNAMQIG LGANLASITA SITKTGGSQR TDNPFDLMIE GDGFFVVNNG VGNFFTKAGS
FNVDAAGTLC TPTGATVMGW QPSREDPRKT VPGSVSPLRI MSPENLYSAP EATTDIYLHG
NIDSMDTNLT SSTGRIVNMS FFDNLGNSYT AEVKIKQSED SKSDYKVTIQ NIYDKKGDSI
FAKKVVDPDT GDITYEASNI TDFNFGNGTG SVTVNDDGTI EVDCDEIDLK FNGANGNFVS
VGDDADNATS IKFKVNADPD PFKDVNIDFS SITMYNNSGT TTVESTKGAK ADGTGAGKAA
GNMSGISIDQ QGMIFGTYDN GDRKLLGQVV VATFSNPAGL EAIGNNMFSA TPNSGEFNGV
GEDITSSGGK FITGVLEMSN VDLSQQFTEM ITTQRGFQAN SRIITTSDTL LEELINLKR