| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2678 |
|---|
| Symbol | |
|---|
| ID | 5742845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 3268469 |
|---|
| End bp | 3269269 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641293770 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001559778 |
|---|
| Protein GI | 160880810 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00324748 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACA AAATATTAAA TCATATATTG GCTTTTATCC AACGCTTTAA CGAACATGAC
ATAACCGGAT CAGCAGCAAA AGCTACTTAT TATCTGCTTT TATCTTTTTT TCCACTATGT
CTTTTGCTTC TTCCTCTATT TGATGATACC CGAATACTAA CCATATTCCT CCCTTCATCA
GTCGCAGTGT TATTAGAAGA TATCGTAAAA CCGGAGCTGG CGTTTCAAAC GACATCTATC
GTAATAATCC TCTGGTCTGC CTCTGCTTCT ATTTGGGCAT TGATGACTGG AATTTACACA
GCATATACCG GTGAAAAAAA ACTAAAACTG ATTCAGGGTA GAATTCGAGC TATATTATTA
ATTTTTATCC TTGTTGCAGC TCTCTTACTG TGTGTATCCG TAACTATTTT TAGCAAATCG
TTAATTTACT GGATTATTGA AGATTTTGTT CACTTAAGCT ATGGTCTCAT GAACGGATTG
CGTTTAGTAA TATTAATTCT AATTATTTAT TTCATAGTAA TTTGTTTGTA TCAATTTACC
CCAAACCTTA AAGTACGTGT ACGATCAATT TCAATTGGTG CAATAATAAC AGCAATTGGC
TGGGTTATTA CTACCTGGGG TTTTGAGGTA TATATGAAAT TATTTAACAA TTACTCTGCT
CTTTACGGCA GTATTGGTGC TTTCCTCGGC CTCACTCTAT GGCTTTATAT TGTTAGTATT
GTTTTACTTT GTGGTGCTGA AATAAATGTT ATGCTGTCTG AGAGAAGAAA CGAAAAAGAG
GATTTGAACC AACATTTTTG A
|
|---|
| Protein sequence | MAHKILNHIL AFIQRFNEHD ITGSAAKATY YLLLSFFPLC LLLLPLFDDT RILTIFLPSS
VAVLLEDIVK PELAFQTTSI VIILWSASAS IWALMTGIYT AYTGEKKLKL IQGRIRAILL
IFILVAALLL CVSVTIFSKS LIYWIIEDFV HLSYGLMNGL RLVILILIIY FIVICLYQFT
PNLKVRVRSI SIGAIITAIG WVITTWGFEV YMKLFNNYSA LYGSIGAFLG LTLWLYIVSI
VLLCGAEINV MLSERRNEKE DLNQHF
|
|---|
| |