Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2669 |
Symbol | |
ID | 5742836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3258027 |
End bp | 3258890 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293761 |
Product | extracellular solute-binding protein |
Protein accession | YP_001559769 |
Protein GI | 160880801 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00514827 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AGATTTTAGG AGTAATTTTA TCACTGACGA TGGTAGCAGG AATCTTAACA GGATGTGGAC AGACAAAAGA GACCAATACT GGTGCTACAG CAAAAGCAAG AACATTAGAA GACATTAAAA AAGACGGAAA GATTAAAATT GGTGTATTCA GTGACAAAAA CCCTTTTGGT TATGTGGATT CCAATGGTGA TATTCAGGGG TATGATGTTT ATTTTGCAAA ACGTATTGCT AAGGATTTAT TAGGAAGTGA AGATAAGATT GAATTTGTTT ATATGGAAGC AGCAAACCGT GTGGAATATT TAAAATCCGC GAAAGTAGAT GTTACTCTTG CTAATTTTAC TGTAACTAAG GACCGTAGTG AGCAGGTTGA CTTTGCACTT CCATATATGA AGGTAGCGCT TGGTGTAGTT TCACCGGATA ATGCATTAAT TACGGATGTA GATCAGTTAA AGGATAAGAC TTTAATTGTA GTAAAGGGGA CAACAGCAGA AACCTATTTC ATGGAGAATC ATTCCGATAT TAAGCTTTTA AAGTTTGATG AATACCAAGA GGCATATGAT GCGTTATTAG ATGGAAGAGG AGATGCGTTC TCAACAGATA ACACAGAAGT GCTTGCATGG GCATTACAAA ATAAAGGTTT TTCCGTAGGT ATTGAGTCCA TTGGTAGTAT TGACGCCATT GCCCCTGCTG TACAAAAAGG GAATAAGGAA TTATTAGACT GGATTAACAA TGAGATTAAG GCATTAGCTG AGGAACAATT CTTCCACAAG GACTTTGAAG TAACTTTAAA GCCTGTGTAT GGTGATAATA TAGATCCAGA AAACCTTGTA GTGGAAGGCG GAGAGCTGAA GTAA
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Protein sequence | MKKKILGVIL SLTMVAGILT GCGQTKETNT GATAKARTLE DIKKDGKIKI GVFSDKNPFG YVDSNGDIQG YDVYFAKRIA KDLLGSEDKI EFVYMEAANR VEYLKSAKVD VTLANFTVTK DRSEQVDFAL PYMKVALGVV SPDNALITDV DQLKDKTLIV VKGTTAETYF MENHSDIKLL KFDEYQEAYD ALLDGRGDAF STDNTEVLAW ALQNKGFSVG IESIGSIDAI APAVQKGNKE LLDWINNEIK ALAEEQFFHK DFEVTLKPVY GDNIDPENLV VEGGELK
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