Gene Cphy_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2669 
Symbol 
ID5742836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3258027 
End bp3258890 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content37% 
IMG OID641293761 
Productextracellular solute-binding protein 
Protein accessionYP_001559769 
Protein GI160880801 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00514827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGATTTTAGG AGTAATTTTA TCACTGACGA TGGTAGCAGG AATCTTAACA 
GGATGTGGAC AGACAAAAGA GACCAATACT GGTGCTACAG CAAAAGCAAG AACATTAGAA
GACATTAAAA AAGACGGAAA GATTAAAATT GGTGTATTCA GTGACAAAAA CCCTTTTGGT
TATGTGGATT CCAATGGTGA TATTCAGGGG TATGATGTTT ATTTTGCAAA ACGTATTGCT
AAGGATTTAT TAGGAAGTGA AGATAAGATT GAATTTGTTT ATATGGAAGC AGCAAACCGT
GTGGAATATT TAAAATCCGC GAAAGTAGAT GTTACTCTTG CTAATTTTAC TGTAACTAAG
GACCGTAGTG AGCAGGTTGA CTTTGCACTT CCATATATGA AGGTAGCGCT TGGTGTAGTT
TCACCGGATA ATGCATTAAT TACGGATGTA GATCAGTTAA AGGATAAGAC TTTAATTGTA
GTAAAGGGGA CAACAGCAGA AACCTATTTC ATGGAGAATC ATTCCGATAT TAAGCTTTTA
AAGTTTGATG AATACCAAGA GGCATATGAT GCGTTATTAG ATGGAAGAGG AGATGCGTTC
TCAACAGATA ACACAGAAGT GCTTGCATGG GCATTACAAA ATAAAGGTTT TTCCGTAGGT
ATTGAGTCCA TTGGTAGTAT TGACGCCATT GCCCCTGCTG TACAAAAAGG GAATAAGGAA
TTATTAGACT GGATTAACAA TGAGATTAAG GCATTAGCTG AGGAACAATT CTTCCACAAG
GACTTTGAAG TAACTTTAAA GCCTGTGTAT GGTGATAATA TAGATCCAGA AAACCTTGTA
GTGGAAGGCG GAGAGCTGAA GTAA
 
Protein sequence
MKKKILGVIL SLTMVAGILT GCGQTKETNT GATAKARTLE DIKKDGKIKI GVFSDKNPFG 
YVDSNGDIQG YDVYFAKRIA KDLLGSEDKI EFVYMEAANR VEYLKSAKVD VTLANFTVTK
DRSEQVDFAL PYMKVALGVV SPDNALITDV DQLKDKTLIV VKGTTAETYF MENHSDIKLL
KFDEYQEAYD ALLDGRGDAF STDNTEVLAW ALQNKGFSVG IESIGSIDAI APAVQKGNKE
LLDWINNEIK ALAEEQFFHK DFEVTLKPVY GDNIDPENLV VEGGELK