Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2666 |
Symbol | |
ID | 5742833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3255879 |
End bp | 3256547 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641293758 |
Product | periplasmic binding protein |
Protein accession | YP_001559766 |
Protein GI | 160880798 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000160035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC TAGGATTGAT AAAAAAGACA GCAGTACTTG CTCTTGTAGC AGCAATGGTA TTCACTGGCT GTGGCAAAAA AAACGAGGGA GATAACAATA GTTCCAATAA CAATCAGAAT CAGGAACAAA ACCAAGAGCA AAATCAGAAT AATACCGAAA ATCCAAATAA TAACCAAGAT GATAATCAGT CAAAAGAGAC TATTACAATA ACAGATGCAA AAGGGGAAGT AAAGATTCCA GCAAATCCTC AAAGCATAGT AGATGTAAGC GGTAATAGTG ATATCTTATC CATTCTTTCG TATTCTGTAA TTGGTACAGC CAATTCAGAT GCTTATGACT ATACTAAGTT TCCAACTTAT TTAGAAGATG TATTAAAGGG AGCAAAAATA CTTGGATATA GTATGCAGGA TACGATGGAT ATTGAGTCTA TTATTGCGTT AGAGCCTGAC TTAATTATTA TTTCAGCGGT ACAAGAAAAG ATGTACGATC AGTTGTCAGA GGTAGCACCG ACTGTTATGT TACAGCTTGC TCAAACGGAC TGGAAAGAGG ACGTATATTC AGTAGCTAAG GTTATGAATA AAACTGAGGA AGCCAATCAA TGGATGGAAC AATACAAGAA AAGATATCAA ACATATAAGA AAAGATATCA AACGTATAAG GTATCTTGA
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Protein sequence | MKKLGLIKKT AVLALVAAMV FTGCGKKNEG DNNSSNNNQN QEQNQEQNQN NTENPNNNQD DNQSKETITI TDAKGEVKIP ANPQSIVDVS GNSDILSILS YSVIGTANSD AYDYTKFPTY LEDVLKGAKI LGYSMQDTMD IESIIALEPD LIIISAVQEK MYDQLSEVAP TVMLQLAQTD WKEDVYSVAK VMNKTEEANQ WMEQYKKRYQ TYKKRYQTYK VS
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