Gene Cphy_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2665 
Symbol 
ID5742832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3253787 
End bp3255541 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content38% 
IMG OID641293757 
Productthreonyl-tRNA synthetase 
Protein accessionYP_001559765 
Protein GI160880797 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000220787 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TACGAAAGGA TGGTTCCATT GTGGAACGAA AATTTGAGGA ATTGGAAGGA 
AGGGAGGCAT TCTGGCATAC GAGTGCACAT GTATTAGCAC AAGCAGTGAA ACGGTTATAT
CCAACAACGA AATGTGCTAT AGGCCCGTCG GTTGAACAAG GATTTTACTA TGATTTTGAG
TTTGACTTTA ATTTCACAGC AGAACACCTT CAAAAAGTTG AGGATATGAT GAAGGCGATT
ATCGAAGAAT CACTTGTCCT TCAACAATTT ATATTGAATC GTGAAGAAGC AATCCATTAT
CTAAAGAAGA AAGGAGAACC ATATAAATTA GAGATACTGA ATGAGTTACC GATTGATGCA
AAAATCAGCT TTTTTGAGCA AGGTGAATTT GTTGATCTAT GTTCAGGGCC TCACCTTAGT
AATGTCAGTT ATATTAAGGC ATTAAAGCTA ATTCAGGTTG CTGGTGCGTA TTGGAGAGGT
AAAGAAGATA ATAAAATGCT TACAAGAATT TATGGGATTT CTTTTCCTAA AAAGCACGAT
CTTGAAGTAT ATCTCAAGCA GCAGGAAGAA GCAAAACTTA GGGACCATCG AAAACTTGGT
AAGGAGCTAG AGTTATTTAC ATTTATGGAG GAAGGGCCTG GTTTCCCATT TTTCTTACCG
AAAGGTATGG TGATAAAGAA TCTCTTACTG GACTATTGGA GAAAGCTACA TGAACGAGAA
GGCTATGTAG AAATATCAAC ACCCATGATG CTCAATCGTA ACTTATGGGA AACTTCGGGA
CATTGGGATC ACTATAAAGA AAACATGTAT CAAACTAAAA TTGATGATGA AATTTATGCA
ATCAAGCCAA TGAATTGTCC TGGAGGAATG CTTGTATATG GAAGTAAACC GCGTTCCTAC
AAGGAGCTTC CACTACGTTT CGGTGAATTA GGATTGGTGC ATCGCCATGA GAAGTCGGGG
CAACTTCATG GGCTCATGAG AGTACGTTGT TTTACACAAG ACGATGCTCA TCTCTTTATG
ACAGAAGAAC AAATAAAAGA TGAGATTAAA GGTGTTGTCC GCCTCATAGA CGAAGTCTAC
AAAAAATTTG GGTTTACCTA TCATGTCGAG CTATCAACAC GTCCGGAAAA CAGTATTGGT
TCCTTAGAAG ACTGGGAGAT TGCTACAGAC GCTTTAAAGA TGGCTTTGGA AGAGATGGAA
CTTCCTTATT TGATTAATGA GGGTGATGGA GCATTTTATG GACCTAAAAT TGATTTTCAT
CTGAAGGACT CCATCGGAAG AACATGGCAA TGCGGAAGTA TTCAATTAGA TTTCCAGTTG
CCACTTCGAT TTGGGATAGA ATATATTGGT GCAGACGGGG AAGCACATCG ACCTATTATG
ATACATCGTG TGATTTTTGG TTCCATCGAG CGATTTTTTG GAATTTTAAT TGAACATTAC
GCGGGTAGAT TTCCAACTTG GTTAGCACCA GTACAGGTTA AGATACTAAC AGTATCGGAG
CAGTTTAATG ACTATGCCCA AGATATTCTT ATGGAATTAA AGCAACAAGG AATTCGAGTT
AGTCTTGACA GTCGCAGCGA AAAGCTAGGA TATAAAGTTA GGGAGGCAAG GCTTGATAAG
ATACCGTATG TACTAATTAT TGGACAAATG GAAATGGAGA ATAAGCAAGT ATCGGTATGG
AACCGTGAAG AAGGTGACTT AGGGGGATAT GTAGTAGAAG ATTTGATTAG TTTAATCAAG
AAAGAAAATG TATAA
 
Protein sequence
MKVIRKDGSI VERKFEELEG REAFWHTSAH VLAQAVKRLY PTTKCAIGPS VEQGFYYDFE 
FDFNFTAEHL QKVEDMMKAI IEESLVLQQF ILNREEAIHY LKKKGEPYKL EILNELPIDA
KISFFEQGEF VDLCSGPHLS NVSYIKALKL IQVAGAYWRG KEDNKMLTRI YGISFPKKHD
LEVYLKQQEE AKLRDHRKLG KELELFTFME EGPGFPFFLP KGMVIKNLLL DYWRKLHERE
GYVEISTPMM LNRNLWETSG HWDHYKENMY QTKIDDEIYA IKPMNCPGGM LVYGSKPRSY
KELPLRFGEL GLVHRHEKSG QLHGLMRVRC FTQDDAHLFM TEEQIKDEIK GVVRLIDEVY
KKFGFTYHVE LSTRPENSIG SLEDWEIATD ALKMALEEME LPYLINEGDG AFYGPKIDFH
LKDSIGRTWQ CGSIQLDFQL PLRFGIEYIG ADGEAHRPIM IHRVIFGSIE RFFGILIEHY
AGRFPTWLAP VQVKILTVSE QFNDYAQDIL MELKQQGIRV SLDSRSEKLG YKVREARLDK
IPYVLIIGQM EMENKQVSVW NREEGDLGGY VVEDLISLIK KENV