Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2607 |
Symbol | |
ID | 5742772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3185539 |
End bp | 3187173 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293697 |
Product | virulence factor MVIN family protein |
Protein accession | YP_001559707 |
Protein GI | 160880739 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.490581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATA AACAAAATAA ATATTTAGTA CAAGGTTCCA TTCTGGCGGT ATCCTCCATA TTAGCCAGAT TGATTGGTAT GTTATACCGG ATACCTCTAA ACCGTATCGT TGGAGACACC GGAATGGGAT ACTATTCGAT GTCCTTTGAG ATATACAATT TAGCTCTATT GCTTTCCTCT TACAGTATTC CATTAGCAGT ATCTAAGCTA GTGTCTATCA GAGATCAGAG AAAAGAATAT AAAAATTCTT ATCGTATTTT CTTATCTGCG ATGGCGTTAT CTGCCTTTGC TGGATTAATT GCGAGTGCAA CTTTATTTTT TGGAGCAACC TTTTGGGCTG GTTTAATTGG CGGAGAAAAT GCTGCGGATA TTGCAATTCC ACTACGTGTC CTTGCACCTA CAATTTTTAT ATTCTCTATT ATGGGTGTAC TTCGTGGATT GTTTCAGGGA AAACGTACCA TGGTACCTAC TGCAATTTCT CAATTATTAG AACAGATTGT CAATGCGATA GTAAGTATTA TAGCGGCTTA TTATTTAATG AAGGAGCACA ATGCTTCTGT TCAGATTGAT GCTTATGGTG CCGCTGGTAG TACAGCAGGA ACATTAGCGG GAGCGATATT TGGTTTACTA TTTTTAGCGA TTATCTATTA CGCGTACCAT CCGGTTTTAA AGAAAAAATG CAGAAAAGAT CAAGCGGAAC ATCAAGAAAG TTATAAAGAA GCCCTTACTG CGATTGTTTA TACCGCGCTA CCTGTTATCA TAAGTCAAAC CGTATTTAAT CTAAGTGGTA TTATTGATGC AAAGTTATGG TCTTGGTTAG CAGAACAACG TGGTTTCTTA AAAGAACAAA GCGCTGCCAT CTTTGGTATC TATTCTACAA AATACAAAAT GCTTACGACG GTTCCAATAG CGATATCAGC CGCACTTGGT ACAGCAATTG TTCCAACGAT TGCGATGGCA CATCAAAAGG AAGATAAAAC GGAGCTGCAT AAAAAGATAG CGATGTCAGT GAAAATGAAT ATGCTAATAG CTTTTCCATC AGCAATTGGA TTAACGGTAT TAGCTAAACC AATTGTATTA TTATTGTTTG GTTATAAAGG AGATGTGGAG CTTAGTGCGC AATTAATTCG TTTAGGTTCG ATGGCAGTTG TACTTTTTGC ACTTTCCACA ATTACCAATG GTGTACTTCA AGGAATTGAT CGTATGATGG TACCAGTGAA GCATGCAGCT ATTTCTCTAG TTATTCATAT ACCAATTGTT TATTTATTAA TAATTGTAGG GAAGTTAGAT GCCTATGGAT TAGTTATTGG TAATATGTCC TTTGCTTTAG TAGTCTGTAT ATTAAATTGG ATTAAAGTGG CGAAGGCATT AAATTATAAG CAAGAAGTTA TGAAAACGTT TGGATTACCG TTTGCAGCTT CCGTTACGAT GGGTATTGTC ACTTACTTTG CCTACGAATT CATGCATCGC ATCATAAATT CCAATACAAT TAGCGTATTG TTCTCCATAA TTGTTGCTGT AATTGTGTAT GGTATTAGTA TTATTTTACT TCGAACTATG GACGAAGAGG AATTATTAGA GATGCCAGCG GGTAGAAGTA TTCTTAAGTT ATGTAAAAAA CTGCATCTGT TGTAA
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Protein sequence | MSNKQNKYLV QGSILAVSSI LARLIGMLYR IPLNRIVGDT GMGYYSMSFE IYNLALLLSS YSIPLAVSKL VSIRDQRKEY KNSYRIFLSA MALSAFAGLI ASATLFFGAT FWAGLIGGEN AADIAIPLRV LAPTIFIFSI MGVLRGLFQG KRTMVPTAIS QLLEQIVNAI VSIIAAYYLM KEHNASVQID AYGAAGSTAG TLAGAIFGLL FLAIIYYAYH PVLKKKCRKD QAEHQESYKE ALTAIVYTAL PVIISQTVFN LSGIIDAKLW SWLAEQRGFL KEQSAAIFGI YSTKYKMLTT VPIAISAALG TAIVPTIAMA HQKEDKTELH KKIAMSVKMN MLIAFPSAIG LTVLAKPIVL LLFGYKGDVE LSAQLIRLGS MAVVLFALST ITNGVLQGID RMMVPVKHAA ISLVIHIPIV YLLIIVGKLD AYGLVIGNMS FALVVCILNW IKVAKALNYK QEVMKTFGLP FAASVTMGIV TYFAYEFMHR IINSNTISVL FSIIVAVIVY GISIILLRTM DEEELLEMPA GRSILKLCKK LHLL
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