| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2598 |
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| Symbol | |
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| ID | 5742763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3174862 |
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| End bp | 3176412 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641293688 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_001559698 |
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| Protein GI | 160880730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000056493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTATAA AGATAGTAAT TGCTTGTGTG ATTACTGCGA TCATAGTTGC TCTGATTGCT
TGGAAATCTG CCATTAGCTA CTATAAAAAA GTCGTAGAAG GCAAAATTGG TAGTGCAGAT
GAAAAAGCAA GAGAAATCAT AGATGAAGCT TTAAAAACGG CGGAAACTAA GAAGAGAGAA
GCTTTGCTTG AAGCGAAGGA AGAGTCATTA AAGACAAAGA ATGAGCTCGA GAGAGAGACG
AAGGAACGTA GAGCCGAGTT ACAGCGTTAT GAAAAACGTG TGTTAACAAA GGAAGAAACA
CTTGACAGAA AAACGGAAGC ACTGGAAAAG AAGGAAGCTA AACTCGTAGC GAAGGAGCAA
GAACTTGATA GACTCCGTGT TGAGGTGGAA GAATCCCATC AGAAACAAGT AGCAGAGTTA
GAGAAAATTT CCGGTTTGAC CTCCGAACAA GCGAAGGAAT ATCTTATTAA AACTGTCGAA
GATGAAGTAA AACATGAAAC TGCTGTACTA ATTAAAGAAT TAGAAAGCAG GGCAAAAGAA
GAGGCTGAGA AAAAGGCAAA GGATTATGTT GTTACTGCAA TTCAGAAGTG CGCTGCAGAC
CATGTAGCTG AGACAACGAT ATCTGTTGTA CAGCTTCCAA ATGATGAGAT GAAGGGTAGA
ATCATTGGTA GAGAAGGACG TAATATTCGT ACCTTAGAAA CCTTAACTGG TGTCGACTTA
ATCATTGATG ATACACCTGA AGCTGTCATT CTTTCTGGCT TTGATCCAAT TCGTAGAGAG
ACTGCAAGAA TTGCTCTTGA GAAGTTAATT GTAGATGGAC GTATCCATCC TGCAAGAATC
GAAGAGATGG TAGAAAAAGC TCAAAAAGAA GTGGAAACGA TGATTCGTGA AGAAGGTGAA
GCAGCAACCT TAGAGGTTGG TGTTCATGGC ATTCATCCGG AACTTGTTAG ACTATTAGGT
AAGATGAAAT TTAGAACAAG CTATGGTCAG AATGCATTGA AGCATTCCAT TGAAGTGGCT
ATTTTATCCG GTTTATTGGC CGGAGAAATC GGTGTTGACG TACGTATAGC TAAGCGTGCA
GGTTTATTGC ACGATATTGG TAAATCAGTT GATCATGAAA TGGAAGGAAC GCATGTACAA
ATTGGTGTTG ATTTATGTAG AAAATATAAA GAATCTCCAA TTGTAATAAA TGCAGTGGAA
GCACATCACG GTGATGTGGA ATTCCAATCC TTAATTGCCT GTATCGTTCA AGCTGCTGAT
ACAATTTCAG CTGCTAGACC TGGTGCTCGT AGAGAAACAT TGGAGACATA TACTAACCGT
TTGAAACAGT TAGAAGATAT TACCAACGGC TTTAAAGGGG TCGATAAGTC ATTTGCAATT
CAGGCAGGAC GAGAAGTACG CGTTATGGTG GTACCAGATC AGGTTACCGA TGACGATATG
GTATTACTCG CTCGTGACTT ATCCAAGAAG ATTGAGTCCG AATTAGAATA TCCGGGCATG
ATCAAAGTAA ATGTAATTCG TGAATCAAGA GTTACAGATT ACGCGAAATA A
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| Protein sequence | MLIKIVIACV ITAIIVALIA WKSAISYYKK VVEGKIGSAD EKAREIIDEA LKTAETKKRE
ALLEAKEESL KTKNELERET KERRAELQRY EKRVLTKEET LDRKTEALEK KEAKLVAKEQ
ELDRLRVEVE ESHQKQVAEL EKISGLTSEQ AKEYLIKTVE DEVKHETAVL IKELESRAKE
EAEKKAKDYV VTAIQKCAAD HVAETTISVV QLPNDEMKGR IIGREGRNIR TLETLTGVDL
IIDDTPEAVI LSGFDPIRRE TARIALEKLI VDGRIHPARI EEMVEKAQKE VETMIREEGE
AATLEVGVHG IHPELVRLLG KMKFRTSYGQ NALKHSIEVA ILSGLLAGEI GVDVRIAKRA
GLLHDIGKSV DHEMEGTHVQ IGVDLCRKYK ESPIVINAVE AHHGDVEFQS LIACIVQAAD
TISAARPGAR RETLETYTNR LKQLEDITNG FKGVDKSFAI QAGREVRVMV VPDQVTDDDM
VLLARDLSKK IESELEYPGM IKVNVIRESR VTDYAK
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