| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2589 |
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| Symbol | |
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| ID | 5742754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3161650 |
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| End bp | 3164493 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293679 |
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| Product | hypothetical protein |
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| Protein accession | YP_001559689 |
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| Protein GI | 160880721 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA AGGCACTGCA TAAAGATTTT AGAATTGAAA TAAAGAAAAC ATGGACCAGA
TTCTTGTCCA TTCTGTTAAT CGTTGCATTA GGAGTAGCTA TGTTTGCGGG CTTACGGGCT
TGTAAAGATG ATATGTTACA GTCGGCAGAC GAGTATTATG ACTCTACTAA TTTAATGGAT
CTTCGTGTAA TATCTACCCT TGGATTAACA GAGGATGATG TTGAGGCTAT TGGCAAATTA
GATGGAGTAT CTATGGTGGA GGGGGCATAT TCGAAAGATG TATTGCTACA TTTTAAAGAC
TCCGACATTG TAGTTAAAAC ATATTCCTTA AATGATACAA TAAATAAAGC TAAATTAATC
GAAGGACGTT TTCCAGAAAA CAATACCGAA TGTTTAGTAG ACACCTTATT ATTAGATAAT
ACCGGTTATA AAGTAGGTGA CACCATAACT TTATCCTTGC CAGAAGGAGA TTTAAAGGAT
GATCTTAAGG AGACTGTGCT AACCATTGTG GGAAGCTGTA CGGACTCACG CTATATGGCA
TTTGGCAGAG GAAATGGATC AATTGGGGAT GGGAAGATTA GTAGCTTTAT CATTTTACCA
AAGGGAAATT ATAAACAAGA GGTGTATACC GAACTTTATG TAACAGTAAA GGATGTAATG
AAGTTAAATT CCTATAGTAC GGAATATGAA GACCGTGTGA AAATTGTTCA AGAAAATATT
GAAGCGATAA CAGAGGAACG TGGAAATATT CGTTATGAAG AAGTAACGAA AGAACCTAGG
GAAGAATTAG AAAAAGGGGA GCAGGAGCTA GCGAAGGCAA AAGAAGACCT TAAACTAAAA
GAAGAAGAAA CTTATGCCAA GATAGAAAAA GGTAATTCCT CTATCGAAGA AGCGCAAACA
ACACTCACTG CGATGAGAAA AGAGCTAGAG GATAAGAAAG CTCTATTAAG TAGCACTTAT
CCGAAAGAAG CAATAGATAA CATGTTTGCT CCAGAGGAAG TGAAATTAAA GGCGTCAGAG
GATGAACTAA AGAATCAGAA GTTTGTATTA GAGGAACAAA GGGCTAAAGC AAAGGAACAG
TTTGCGAAAG CAAAAGAGGA GATTGCATTA AACGAAAAAA CACTCCAAGA AGGAAGAGAC
GAACTTTCAA AGGTTGAGCA TCCTACTTGG TATGTATTGA ACCGTGATAC CATCGAATCT
TTCGTTTCGT ATGAAATGGA TGCTGATCGT ATGGATGCGA TTTCCAAGGT ATTTCCAGCA
ATATTTTTCT TTGTCGCAGC GCTTGTATGT CTTACTACAA TGACCAGAAT GGTAGATGAA
CAGCGTACCC AAATTGGTAT TCTAAAGGCA CTTGGTTATG GGAAGATGTC GATTGCAGGT
AAATTTATTA AGTATGCACT TTTTGCAACA GTAAGTGGTA GCATCATTGG TGTTCTTATA
GGGCAGAAAA TCTTCCCTTA TGTCGTTATC AATGCATATC GGATCATGTA TGGATCCTTA
CCAGTGATAG CAATACCTTA TCGCCCCTAT TATGCTATTT TGGCGGGTTC CTTCGCTGTA
TTATGTACAA TGCTAGCTAC CTTTATGGCA TGTATGAAGG ACTTAAAAGC GGAGCCAGCA
CAGTTAATGC GTCCAGTCAC TCCAAAGGCA GGAAGAAGAA TCTTATTAGA ACGAATCGGA
TTTATATGGA ATCGTTTGAA CTTTACTAAG AAGTCAACAC TACGTAATTT ATTCCGATAT
AAAAAACGTT TCTATATGAC AACCATTGGT ATAGCAGGCT GTATGGCTTT ATTAATTGTT
GGATTTGGTA TTAAGGATTC CATCGGAGTA ATGTCAGAAT TACAGTATAC AGAGTTATTC
CATCAAGATG CTTCAATTAC GTTGACCGAG AAGATCACCA AAGAGAAAAG AGATTCGTTA
ATTCCAAAGA TATTAGAGGA TGATAGAGTT CTTGATGCTA CTTTGATTTT TGATAAATCA
ATGAAGTTCT CAAATGGCAG TTTAAATCGC TCTGCTTCTC TAGTGGTTGT TGAGAGTGGT
AGCAATTATA ACGAATTTTA TACATTCCGT AATCGTAATA CAAAAACAAC ATATCATCTT
AACGAGGATG GAGTAATTAT CACAGAAAAG CTTGCAAAGT TGCTTTCGTT ATCGGTGGGT
GATACCATAA CCATTGAGAT GGATAACTTT AATAAACACA ATGTGGCCGT TACTGCAATT
TCAGAAAATT ATATGGGGCA TTATGTGTTT ATGACCTCAG ACTTCTATCA TTCATTATAT
GGGGAGGAAC CATCCTATAA TCAAATCTTA TTAATAAATA AAAGTAGTGC GAAAGAATTT
GAAGAAGGGC TATTTCGAGA TCTTTTAGTA AAGTATAAAG ATATTATGGC AATTTCATCG
ACAAACACAT TTAACAACTA TATTCACGAT ATGCTTTCAA GTTTAGATAT CATTGTCTAT
GTACTAATCA TCTGTGCCGG AATGTTAGCG TTTATTGTTT TATATAATCT AAGTAATATA
AATATCAATG AACGTAAACG AGAACTTGCT TCCTTAAAAG TTCTAGGTTT CTATGATGGT
GAAGTGAATT CGTATGTAAT GAAAGAAAAT AATCTTCTAA CTCTCATAGG AATGGTATTC
GGTGTGTTTT TAGGTATTGT CCTTCATCGA TATATCATCA TTACTTGTGA GGTAGATATG
GTGATGTTTG GTCGCTTGAT AAAACCGATG AGCTTGATAT ATAGTGCTGG AATCACGATG
ATCTTTACTT TGGTAATTAG TCTTTTTATG TACTTTAAGC TTAGGAAAAT TGATATGATA
GAATCCTTAA AAAGCGTGGA ATAA
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| Protein sequence | MKKKALHKDF RIEIKKTWTR FLSILLIVAL GVAMFAGLRA CKDDMLQSAD EYYDSTNLMD
LRVISTLGLT EDDVEAIGKL DGVSMVEGAY SKDVLLHFKD SDIVVKTYSL NDTINKAKLI
EGRFPENNTE CLVDTLLLDN TGYKVGDTIT LSLPEGDLKD DLKETVLTIV GSCTDSRYMA
FGRGNGSIGD GKISSFIILP KGNYKQEVYT ELYVTVKDVM KLNSYSTEYE DRVKIVQENI
EAITEERGNI RYEEVTKEPR EELEKGEQEL AKAKEDLKLK EEETYAKIEK GNSSIEEAQT
TLTAMRKELE DKKALLSSTY PKEAIDNMFA PEEVKLKASE DELKNQKFVL EEQRAKAKEQ
FAKAKEEIAL NEKTLQEGRD ELSKVEHPTW YVLNRDTIES FVSYEMDADR MDAISKVFPA
IFFFVAALVC LTTMTRMVDE QRTQIGILKA LGYGKMSIAG KFIKYALFAT VSGSIIGVLI
GQKIFPYVVI NAYRIMYGSL PVIAIPYRPY YAILAGSFAV LCTMLATFMA CMKDLKAEPA
QLMRPVTPKA GRRILLERIG FIWNRLNFTK KSTLRNLFRY KKRFYMTTIG IAGCMALLIV
GFGIKDSIGV MSELQYTELF HQDASITLTE KITKEKRDSL IPKILEDDRV LDATLIFDKS
MKFSNGSLNR SASLVVVESG SNYNEFYTFR NRNTKTTYHL NEDGVIITEK LAKLLSLSVG
DTITIEMDNF NKHNVAVTAI SENYMGHYVF MTSDFYHSLY GEEPSYNQIL LINKSSAKEF
EEGLFRDLLV KYKDIMAISS TNTFNNYIHD MLSSLDIIVY VLIICAGMLA FIVLYNLSNI
NINERKRELA SLKVLGFYDG EVNSYVMKEN NLLTLIGMVF GVFLGIVLHR YIIITCEVDM
VMFGRLIKPM SLIYSAGITM IFTLVISLFM YFKLRKIDMI ESLKSVE
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