Gene Cphy_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2580 
Symbol 
ID5742745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3149242 
End bp3152451 
Gene Length3210 bp 
Protein Length1069 aa 
Translation table11 
GC content34% 
IMG OID641293670 
Productnon-specific serine/threonine protein kinase 
Protein accessionYP_001559680 
Protein GI160880712 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00984411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAT TATCTAGAAC TGGGATACGT AACCTAGCAA CGAGTGACCT CGTTTATTCC 
CGTGGCCTGC AGTATTATAA AAGCAACCGA GTGACAAATG CGACTTTCTC AAAATCCACA
AACCAATATA AATTCCTTGT AAAAGGAAGT TTCACATATC AAGTTAGTAT TACAGAGAAA
GAAGATGGGG CATTTGATTA TACTTGCAAT TGTCCATCTC ATTTGAAAGA AAAAGGAGCC
TGCAAGCATG TGGTAGCAGG ACTGTTGTTT TTATTAAAGT ACCAAGAAAA GTCAACGATG
GAAGAACCAA GAACACCGGA AGAGAAACGG GCTTTTCAAG TACTTGATTA TTTTGCGAAT
CAAGATGACA CTCATGCTGA GGGTGAAATC TTTAAAATAG TTCCAACGAT ATCTTTACCA
ACCATGTTAC GTCCAGATTC AAATGCACTT CTTATGCTAC ATGCTGGAAA CAATCATATG
TATAAGGTTC AATCTATAAA GAAATTTTTG ACGGATTATA ATACTAATCA AAATATTATT
CTTGGCAAAG ATTTTAAATT TATTGCTGGA GAAAGTGAAT TTGATAGATC ATCAAAAAAA
TTGATGGAGT ATTTAGTAGG AATCTTAGAA ATACAAGAGT TAATTGATAA AACCTCCTAT
GCCAAGCTAT TTGCAAAACA TCAAATGATG TTATCAAAAA GTATGTTGTT AAAATTACTT
TCTTTGTTGG GAACAAGCTC TTTTCGCTTG GAACTAAATC AAAAAATCTA TGAAGATGTT
AAATATATCA ATGGAAATCC CAATATTGCA TACGATTTAG ATGTTTATGA TGATAGTATT
TTACTAGATT ATAAAGAAAA AGAACCTGTG ATTCCATTGT CCGAGGGTGG AGAATTAATC
TTTTATAATG GCTTTATCTT TACTCCGAAT AAACACTTTA TAAAAAATTA TGTACCTTTT
TATAATACCT TGGGTCGAGA AAAGAAGCCA TTGGTTTTTC GAGGAGATAA TAGACAACGC
TTTTTAGAAG AAGTACTGCC GAAGTTACAC GAGACTATGG AGATTGAGAT ACCAGAAAGC
TTAAAGAGCA GGTATCTAGC ATTACCGATG CAGGCGTGTG TCTATCTTGA CCGCTATCAT
GGTGGAATTA AGGCAGAACT TAAGTTTCGA TATGGTGATT ATGAATTTAA CTGCTTTGAA
AGCCCAAGAA GTGATGAATT TATCGTAGTT CGAAGTAAGG AAGAAGAATA TGAGGTAATG
CGACTCTTAG AACAACTTGA TTTCGAACCG CATAGTACAT TTTATCATCT AAAGAATGAT
AATAGCATCT ATGAGTTCCT AACAGGTCGT ATCCATGATT TACAAGCTGT AGCTCAGCTT
TATTATTCGG ATACCTTTAA GAAATTAGGA ATAAAAAATA GTAGTAACTT TAAGGTTGGT
CTGCGTATTA GTAACGATAT TGATTTACTT GAGATGGATT TAGAATCGGA AGATATTCCG
CAGGAAGAAT TGAAAGCTCT ATTTCGTTCC TTCCAACTAA AGAAGAAATA CTACCGTTTA
AAAGATGGCA GTTTTATTAA CTTAGAGGAT GAGCATATTG CTAAGATGTC AAATATCTTA
GATGATTTAA ATGTTTCCGT GAAGTCTCTT TCCAATGAGT CTATTAAGTT ATCTAAAAAT
AAAGCGTTTT ATTTGGAAGA TGCCCTTAAT GGTAGTAATT TATATGTAGA AAAAAATGAG
GATTTTTCGA AGCTTATTGA AAACATTTTA CATCCGGATA ATCGTGAGTA CATCACTCCT
GAAAATATAG ATGCTACACT AAGACCTTAT CAGAATGTGG GGTATCGCTG GTTACGTTCG
TTGGCAGACA ATAATCTGGG TGGCATTTTA GCAGATGATA TGGGTCTTGG TAAGACATTA
CAATCTATTG TTTATATTTC CTCTATTGTA GATGAAGATA AAAAGAAGAA TAAAAAATTT
CTTATCGTTT GTCCAACCTC ATTGGTTTAC AACTGGTTAG ATGAGTTTGA ATCTTTTGCA
CCACACTTAA GAGCAGGGGT TGTATCTGGA ACCCCTACAG AGAGACAGGA GAGAATCGAG
CAAATTAAAG ATTTTGATGT ATTAGTTACC TCCTATCCGC TGATCCGAAG AGATATCAAA
CATTATCAGG CAATTACATT TCATACTGTA TTTATTGACG AGGCGCAATT TATAAAAAAC
GCTGCATCTA TTAATGCGCA ATCCGTTAAA TTATTGGATT CAACTCATCG ATTCGCATTG
ACTGGTACAC CGATTGAGAA TAGCTTATCC GAGTTATGGT CTATTTTCGA TTTTATCATG
CCTGGATATC TCTTGACACA CTCGAAGTTT GTAAATAAAT TCGAAAAACA AATTTTAAAA
GAAGATACAG AAGCATTAGA GAATTTAAAT CGTAGAATAC ATCCATTTGT TTTACGACGT
ATGAAAAAGG ATGTGTTAAA TGATTTGCCA GATAAATTAG AAGAGAAAAT CGTGACAGAG
ATGACAGAAG AGCAGAAAAA GGTATATGTC TCTTATCTTG CTGAAGTTCG CAATGATATT
TATAGTGAAA TTGCTACGAA GGGCATTGAA AAAAGTCAGA TGAAGATCTT AGCTGCGCTT
ACTAGACTAC GCCAAATCTG TTGTCATCCC TCAACCTTTT TGGATGAATA TGATGGTGGT
AGCGGAAAAC TTGATTTGTT GTTAGAATTA ATAGAAGAAG CGTTGGCAAA TGATCATCGA
ATACTAATCT TTTCCCAGTT TACATCGATG TTAAAGATTA TGGAGGCGGA ACTAAAGAAG
CTTTCTGTGT CATATTTTTA TCTGGAAGGC AGCACTCCAA TAACCGAACG AAATGATTTT
GTAAAGCGAT TTAATGCTGG AGAAGGTTCT ATCTTTTTAA TTTCATTAAA AGCTGGTGGA
ACTGGACTTA ATTTAGTTGG CGCAGATACG GTAATTCATT ATGATCCATG GTGGAATCCA
GCGGTAGAAG AGCAAGCGAC CGATCGAGTT TACCGTATTG GCCAGAAGAA TAATGTCCAT
GTCATTAAAC TATTAACAAA AAATACGATT GAGGAAAAAA TCTTTAAACT TCAAAAGAAG
AAAAAAGAGC TTTCTGATTC CATCATTCAA TCGAAGGAAG TGTTTATTAA TACTTTATCA
AAAGAAGAGT TGGAAGAGAT TTTTTCTTAA
 
Protein sequence
MLRLSRTGIR NLATSDLVYS RGLQYYKSNR VTNATFSKST NQYKFLVKGS FTYQVSITEK 
EDGAFDYTCN CPSHLKEKGA CKHVVAGLLF LLKYQEKSTM EEPRTPEEKR AFQVLDYFAN
QDDTHAEGEI FKIVPTISLP TMLRPDSNAL LMLHAGNNHM YKVQSIKKFL TDYNTNQNII
LGKDFKFIAG ESEFDRSSKK LMEYLVGILE IQELIDKTSY AKLFAKHQMM LSKSMLLKLL
SLLGTSSFRL ELNQKIYEDV KYINGNPNIA YDLDVYDDSI LLDYKEKEPV IPLSEGGELI
FYNGFIFTPN KHFIKNYVPF YNTLGREKKP LVFRGDNRQR FLEEVLPKLH ETMEIEIPES
LKSRYLALPM QACVYLDRYH GGIKAELKFR YGDYEFNCFE SPRSDEFIVV RSKEEEYEVM
RLLEQLDFEP HSTFYHLKND NSIYEFLTGR IHDLQAVAQL YYSDTFKKLG IKNSSNFKVG
LRISNDIDLL EMDLESEDIP QEELKALFRS FQLKKKYYRL KDGSFINLED EHIAKMSNIL
DDLNVSVKSL SNESIKLSKN KAFYLEDALN GSNLYVEKNE DFSKLIENIL HPDNREYITP
ENIDATLRPY QNVGYRWLRS LADNNLGGIL ADDMGLGKTL QSIVYISSIV DEDKKKNKKF
LIVCPTSLVY NWLDEFESFA PHLRAGVVSG TPTERQERIE QIKDFDVLVT SYPLIRRDIK
HYQAITFHTV FIDEAQFIKN AASINAQSVK LLDSTHRFAL TGTPIENSLS ELWSIFDFIM
PGYLLTHSKF VNKFEKQILK EDTEALENLN RRIHPFVLRR MKKDVLNDLP DKLEEKIVTE
MTEEQKKVYV SYLAEVRNDI YSEIATKGIE KSQMKILAAL TRLRQICCHP STFLDEYDGG
SGKLDLLLEL IEEALANDHR ILIFSQFTSM LKIMEAELKK LSVSYFYLEG STPITERNDF
VKRFNAGEGS IFLISLKAGG TGLNLVGADT VIHYDPWWNP AVEEQATDRV YRIGQKNNVH
VIKLLTKNTI EEKIFKLQKK KKELSDSIIQ SKEVFINTLS KEELEEIFS