Gene Cphy_2565 details

Gene Information

• Locus tag: Cphy_2565
• ID: 5741843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 3130923
• End bp: 3132809
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641293655
• Product: radical SAM domain-containing protein
• Protein accession: YP_001559665
• Protein GI: 160880697
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGC TAGCATTATC CGATGAAATA CTATTAACGA TAGATAAGCC AGCTCGTTAT 
ATCGGTAACG AAGTAAATAT GGTGGTTAAA GATAAGGAAA AGGTAGATAT CCGTTTTTGT 
ATGTGTTTTC CTGACGTATA CGAAGTTGGT ATGTCACACC TTGGTATTCA GATTCTTTAT 
GATATGTTTA ATCAAAGAGA AGATACTTAT TGCGAACGTG TATACTCTCC ATGGACGGAT 
TTGGACAAGA TTATGAGAGA GAAGAACATA CCATTGTTTG CTCTTGAGTC TCAGGATCCG 
ATAAAGGATT TTGACTTTCT AGGAATTACA TTACAATATG AGATGTGTTA TACCAACATT 
CTGCAAATCT TAGATTTATC AGGAATTCCA ATCTATGCAA AAGATAGAAC AGATGAGGAT 
CCTATCATTA TTGGTGGTGG ACCATGTTCT TATAACCCAG AACCTATCGC AGATTTCTTT 
GATATGTTTT ACATCGGGGA AGGTGAAACA GTATACGATC AGGTACTTGA TGCATATAAG 
GAGAACAAGG CAGCAGGAGG TAGCAGAGCA GATTACTTAA AGCGCGTTGC ACAGATTGAG 
GGCATCTATG TTCCAGCTTT TTATGATGTA ACATATAAGG AGGATGGAAC CATTGCTTCT 
ATGACTCCAA ATAATGAGTT TGCAAAAGAT AAGGTAAAGA AACAGATAGT GATGAACGTT 
AGTGATACGT ATTATCCTAG AAAACCGTTA GTACCTTATA TTAAGTCAAT TCAGGATCGT 
GTGGTACTTG AAATTCAACG TGGATGTATT CGTGGATGTC GTTTCTGTCA GGCTGGTATG 
TTATACCGAC CAACAAGACA AAGAGATGTT GATTATCTAA AAGACTTAGC AAAAGATATG 
ATTGAATCTA CCGGACATGA AGAGATATCT CTTAGTTCTC TAAGCTCCAG TGATTATGAT 
AAACTTCAAG AACTCGTTTA TTACTTAATC GATGAGTTCA AGAAGAATGG TGTGAATATC 
TCTCTACCAT CTCTTCGTAT TGATGCGTTC GCACTTGATG TTATGAGTAA GGTGCAGGAT 
ATCAAAAAGA GTAGTCTTAC CTTTGCACCA GAGGCAGGTT CCCAGCGTCT TCGTGATGTA 
ATTAATAAAG GACTTTCCGA AGAAGTGATT TTAAAAGGTG CGATGGATGC GTTCCTTGCA 
GGATGGAATA AGGTGAAACT TTATTTCATG TTAGGTCTTC CAACAGAAAC AATGGAAGAT 
ATTGAAGGAA TTGCTACGAT TTCTGATAAG ATAGCAAGAG AGTATTATAC TATTCCAAAA 
GAAGAGAGAA ATGGTAAGGC GCAGATTACT GCAAGTACCT CCTTCTTTGT TCCAAAACCA 
TTTACCCCAT TCCAGTGGTC AAGAATGGTG ACCAGAGAAG AATTCGGGGA AAAGCAACGA 
TTCTTAAATG GTAAGATGAA GGAACAATTA AACTATAAGA GTATTCGTTA CAATTGGCAT 
GATGCAGAAG TTACGATTCT TGAAGGTATT TTCGCACGAG GTGATCGTAA AATTGCGAAA 
TCCATCTATG ATGCATATCA AAAGGGTTGT ATTTACGATG CTTGGTCAGA GTATTTTAAC 
TATAAAACTT GGATGGAAGT GTTTGAAGAA AATGGCGTAG ATATCGCCTT CTATACAAGT 
AGAGAACGAA GTGAAGATGA AATTTTCCCT TGGGACTTCA TTGATATTGG TGTTACGAAG 
AAATTCCTTC GTAAGGAATA TGAACATGCA ATAGAAGAAA CGGTAACTCC AAACTGTAAG 
ATGTCTTGTT CTGGCTGTGG TGCTGCGGCT TTTCAAGGTG GAATATGCTT TGAGGCGCAT 
ACAGATAACG GCAATATAAA TTGCTAG 

 

Protein sequence

MKKLALSDEI LLTIDKPARY IGNEVNMVVK DKEKVDIRFC MCFPDVYEVG MSHLGIQILY 
DMFNQREDTY CERVYSPWTD LDKIMREKNI PLFALESQDP IKDFDFLGIT LQYEMCYTNI 
LQILDLSGIP IYAKDRTDED PIIIGGGPCS YNPEPIADFF DMFYIGEGET VYDQVLDAYK 
ENKAAGGSRA DYLKRVAQIE GIYVPAFYDV TYKEDGTIAS MTPNNEFAKD KVKKQIVMNV 
SDTYYPRKPL VPYIKSIQDR VVLEIQRGCI RGCRFCQAGM LYRPTRQRDV DYLKDLAKDM 
IESTGHEEIS LSSLSSSDYD KLQELVYYLI DEFKKNGVNI SLPSLRIDAF ALDVMSKVQD 
IKKSSLTFAP EAGSQRLRDV INKGLSEEVI LKGAMDAFLA GWNKVKLYFM LGLPTETMED 
IEGIATISDK IAREYYTIPK EERNGKAQIT ASTSFFVPKP FTPFQWSRMV TREEFGEKQR 
FLNGKMKEQL NYKSIRYNWH DAEVTILEGI FARGDRKIAK SIYDAYQKGC IYDAWSEYFN 
YKTWMEVFEE NGVDIAFYTS RERSEDEIFP WDFIDIGVTK KFLRKEYEHA IEETVTPNCK 
MSCSGCGAAA FQGGICFEAH TDNGNINC