Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2554 |
Symbol | |
ID | 5741832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3121808 |
End bp | 3122647 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641293644 |
Product | degV family protein |
Protein accession | YP_001559654 |
Protein GI | 160880686 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000605397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACACA TTATAACTGA TTCAACATCC GATATAACAC AAGTTCAAGC AGCAAGAGAA GACTTGATTG TAGTACCTCT ACATAATTTA TTTGGTGTAG AGGAATACCT TGACGGTGTT ACAATTTCAA CTGAGGAGTT CTACCAAAGA CTTGCAACCG CGGAAGATTT ACCAACTTCA AGTCAACCTT CTCCAGAGGA ATTCTTAACT CATTTTAATC GTTGTAAGGA AGAGGGAAGT AGCGCAGTTG TTATTACAAT CTCTAGTAGA TTAAGTGGAA CCTTTCAAAG TGCTTGCATA GCAAAAGATA TGTGTGAATA TGATGAAATC TATCTTGTTG ACAGCTTTAC TGCAACGCTA GGTTTAAACA GTCTTGTTCA GTATGCTAAG ATACTAAGAG AGAGAGGATT ATCTGCGAAA CAAATCGCTG AAGAGTTAGA AGATAAGAAA CAAAAAGTCA GAGTATTTGC CCTAGTGGAT ACGTTAAAAT ACTTAAAAAA GGGTGGACGC TTATCGGCAT CTGCGGCACT TGCAGGAACA TTACTTAATA TCAAACCTAT TATAGAAGTT AAGGATGGTG TTGTTGAGGT TGCTGCTAAG TCGAGAGGTA TACAAGGTGC ATATAAGAAA GTGATGGAGT TGGTGGAAGA AGCGAATGGT ATCGATATGG AGTTTCCATA TTGCATCGGA TATACTGGCG ATATTAATCT AACACAGAAC TTTGATGTAC ATTCTAAAGA GTATCTAAAA AAACAAGATA TTACTAAGGT TGCCATTGGT AGTACGATTG GAGTTCATGT AGGGCCTGGT GCGTGCGGAA TTGGATTCTT TAGTAACTAA
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Protein sequence | MLHIITDSTS DITQVQAARE DLIVVPLHNL FGVEEYLDGV TISTEEFYQR LATAEDLPTS SQPSPEEFLT HFNRCKEEGS SAVVITISSR LSGTFQSACI AKDMCEYDEI YLVDSFTATL GLNSLVQYAK ILRERGLSAK QIAEELEDKK QKVRVFALVD TLKYLKKGGR LSASAALAGT LLNIKPIIEV KDGVVEVAAK SRGIQGAYKK VMELVEEANG IDMEFPYCIG YTGDINLTQN FDVHSKEYLK KQDITKVAIG STIGVHVGPG ACGIGFFSN
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