Gene Cphy_2552 details

Gene Information

• Locus tag: Cphy_2552
• ID: 5741830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 3119382
• End bp: 3120035
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641293642
• Product: hypothetical protein
• Protein accession: YP_001559652
• Protein GI: 160880684
• COG category: [R] General function prediction only
• COG ID: [COG1451] Predicted metal-dependent hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000141461
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTA TACTGAATGA TAAGTCTATC AGTTTTCAAA TACAATATAC AAAGGCTAGT 
AAATTTAACC TCGATTTTTC ACCAGAAGGT CTAATCACTT TAAAAGCTCC AAAAAAATCA 
ACTATGGAAG AAATCAATGC CTTTATGAAA TCAAACTCAA AGGTCTTATT AAAATTTGAA 
GAAAGAATGA GTAATCGTAC TTATCTTTCT AGTGTTAAAA CGTATGAAAG TGACGAAAAC 
TTTTTATTCC TTGGTAAAGT TCACAAACTC TCCGATCTTT TATCTGAAAT TCCTGAGACA 
GAGGATGGAG TACAAGAAGC TCTAAAAAAG TTTTACACAG CAAAAACCAA GGAGATTATC 
ACGGAACGAC TGGCTATCTA CGAACCTATC ATTGAGGTAA AAGCGAAAGG ATTCAAAATT 
GTAGACTCTC CAGCCACCTG GGGGACCTGT AATTCAAATA AACAGCTAAC CTTTAACTAC 
AAGTTATCCA TGGCCAGATT GAGTGCAGTC GATTATGTTG TAATTCACGA ACTTTGTCAT 
ATCATGCACT TAAATCATGA TCGGTCTTTT TGGAGAAAAG TTGGTATGTA TGATAAAGAC 
TATAAAACAC ATCAGGAATA CTTAGCACGT TTTGGAGCAT TCATGACAAT TTAA 

 

Protein sequence

MEIILNDKSI SFQIQYTKAS KFNLDFSPEG LITLKAPKKS TMEEINAFMK SNSKVLLKFE 
ERMSNRTYLS SVKTYESDEN FLFLGKVHKL SDLLSEIPET EDGVQEALKK FYTAKTKEII 
TERLAIYEPI IEVKAKGFKI VDSPATWGTC NSNKQLTFNY KLSMARLSAV DYVVIHELCH 
IMHLNHDRSF WRKVGMYDKD YKTHQEYLAR FGAFMTI