| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2543 |
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| Symbol | |
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| ID | 5741821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3113407 |
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| End bp | 3114021 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293633 |
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| Product | LexA family transcriptional regulator |
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| Protein accession | YP_001559643 |
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| Protein GI | 160880675 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0539699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGATATG GGAAAATAAG TTCAAAGCAA CAGGAAATAC TTGACTATTT AAAGGCACAA
ATAATTAGCA GAGGTTATCC ACCTGCAGTT CGGGAGATTT GCGAAGCCGT TAATTTAAAG
TCTACCTCTT CTGTTCATTC CCATCTTGAG ACATTAGAAA AGAACGGCTA CATAAGAAGA
GATCCTTCCA AACCGAGAGC AATAGAAATC GTCGACGGTG AATTTAATCT AACAAGAAGA
GAACTAGTAA ATGTACCTAT CGTTGGTACG GTTACTGCTG GTCAGCCTAT CTTAGCGGTG
GAAAATATTG ATGGATATTT TCCAATACCA ACAGAATATA TGCCAAATGA GCAATCCTTT
ATGTTAAAAG TAAAGGGCGA CAGTATGATT AATGCTGGTA TTTTTAATGG TGATCAGATC
CTTGTGAAAA AGCAGACAAC TGCAGAAAAT GGGGATTTTG TCGTTGCGTT AATTGATGAT
TCTGTTACAG TAAAGACTTT CTATAAAGAA AAAGGTTATT ACCGTTTACA GCCAGAGAAT
GATTTTATGG AACCTATTAT TGTTGAAGAT GTGCAAATTC TTGGTATCGT AATCGGATTA
TTCCGTTTAT TTTAA
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| Protein sequence | MGYGKISSKQ QEILDYLKAQ IISRGYPPAV REICEAVNLK STSSVHSHLE TLEKNGYIRR
DPSKPRAIEI VDGEFNLTRR ELVNVPIVGT VTAGQPILAV ENIDGYFPIP TEYMPNEQSF
MLKVKGDSMI NAGIFNGDQI LVKKQTTAEN GDFVVALIDD SVTVKTFYKE KGYYRLQPEN
DFMEPIIVED VQILGIVIGL FRLF
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