Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2540 |
Symbol | |
ID | 5741818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3110347 |
End bp | 3111657 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641293630 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001559640 |
Protein GI | 160880672 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.341654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC ATAAAGTGAA ACAGATAAAT GGTACCCTCA CCGTACCAGG TGATAAGTCC ATCTCACACC GTGCAGTTAT GTTTGGAGCT ATAGCAGAAG GAACTACAGA AGTTTATAAT TTCTTAAAAG GTGCTGACTG TCTCTCAACC ATACAGTGTT TTAGACAGCT GGGAATCAAT ATAGAAGAAG ATACTAAACA GCAAGTGATT CGAATTCACG GAAAAGGACT TCATGGATTA ACTCCACCTT CTACTATTCT TGATGTAGGT AATAGTGGAA CGACGCTCCG TCTTATTTCT GGAATATTAA GTGGTCAACC ATTTGAAAGT AACATTACCG GTGATAGTTC TATACAAAAA CGGCCAATGA ATAGAGTTAT TACACCTCTA AGCCTAATGA ATGCTGATAT TAAAAGTGTT CTAGGAAACG GTTGTGCACC ACTCTGCATT AATGGATCCT ATCAAAACGG CGCAAAGTCT GCCTTAAAGA GTATTCATTA TAATTCTCCT ATTGCCTCTG CACAAGTTAA ATCTTCTATT CTTTTAGCAG GTCTATATGC AGAAGGTGAA ACTTCAGTAA CTGAGCCATA CGTTTCGAGG AATCATACCG AACTTATGTT ACAAAAATTC GGTGCAAATC TTAGCGTAAA CGACAAAACA GTAACTATTC AACCTGAACC AAGGTTAATG GCACAAAAAG TTCATGTACC AGGAGACATC TCTTCTGCCG CTTATTTCCT TGCTGCTGCT TGTATACTCC CTAATTCTGA ACTTGTTATA AATAATGTAG GTGTAAATCC TACACGTGAT GGAATCATCG ATGTCTTGCT TGCGATGGGT GCTGACATTA CGAAAGAAGA TTTAAAGAAT CAAGAAGGTG AAGCAGTATG CAATCTAAGG GTTAGAAGCA GTAAACTTCA TGGCACTGTG ATTGAAGGAA GTATCATCCC TCGTCTTATT GATGAGATAC CTGTTATCGC TGTTGTTGCA TGTTTTGCAG AAGGCGATAC AATCATCAAA GATGCAGCCG AATTAAAGGT GAAAGAGTCC AATCGTATTG ATGTAATGGT ACAACAACTG AAACATATGG GCGCTAATCT TACTGCAACC GAAGATGGTA TGATTATTCA CGGAGGCCAA AAGCTATCTG GTACTGTCAT CGAAAGTAAA GAAGATCATC GTATTGCAAT GTCTTTCGCT ATTGCAAGCC TAATGGCCGA AGGCGAAACG ACTATTCAAG GTGCAGAATG TGTTAACATC TCCTATCCAG AATTTTATCA AGATTTGTAT AGACTAACCT GCGATAATTA G
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Protein sequence | MKFHKVKQIN GTLTVPGDKS ISHRAVMFGA IAEGTTEVYN FLKGADCLST IQCFRQLGIN IEEDTKQQVI RIHGKGLHGL TPPSTILDVG NSGTTLRLIS GILSGQPFES NITGDSSIQK RPMNRVITPL SLMNADIKSV LGNGCAPLCI NGSYQNGAKS ALKSIHYNSP IASAQVKSSI LLAGLYAEGE TSVTEPYVSR NHTELMLQKF GANLSVNDKT VTIQPEPRLM AQKVHVPGDI SSAAYFLAAA CILPNSELVI NNVGVNPTRD GIIDVLLAMG ADITKEDLKN QEGEAVCNLR VRSSKLHGTV IEGSIIPRLI DEIPVIAVVA CFAEGDTIIK DAAELKVKES NRIDVMVQQL KHMGANLTAT EDGMIIHGGQ KLSGTVIESK EDHRIAMSFA IASLMAEGET TIQGAECVNI SYPEFYQDLY RLTCDN
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