| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2538 |
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| Symbol | |
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| ID | 5742609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3107946 |
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| End bp | 3108959 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641293628 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001559638 |
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| Protein GI | 160880670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000169868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATCG TTATGAAGCC AAATGCAAAA AAGGAGTCAA TTGACAATAT ATTGAGACTG
ATTAAAGAAA AAGGACTTGA TGTGCATATC TCGGCTGGGA AAGAAGTCAC CATTATTGGT
GTCATTGGAG ATAAAAGTAA ATTATCTTGC TGTAATCTTG AGATTGCAGA AGATGTTGAT
CATATTTTAC CTGTGACCGA GTCCTATAAG TTAGCAAATA AAAAATTTCA TCCGGAACCA
ACTATTGTTA AAGTTGGTAA TACAACCATT GGTGGCGATG AACTTTGTGT TATGTCTGGT
CCATGTGCAG TGGAAAGTGC ACATCAGGTT CTCGAAACAG CTATTGCAAT TAAAAAGTCA
GGTGCAACTA TCTTAAGAGG TGGTGCATAC AAACCAAGAA CTTCCCCTTA CTCATTCCAA
GGTCTTGAGG AGGAAGGCCT AAAGTATATG AAGGAAGCAA GAGAAGCTAC AGGTCTAGCA
GTAGTTTGTG AGGTTACTAG TCTTGCAGCG ATTGAAGCCG CAGTAAAATA TGTTGATATG
TTACAAATTG GAGCAAGAAA TATGCAAAAC TTTTATTTAC TAAAAGAAGC TGGTAAAACT
GGTTTACCTG TTCTTTTAAA ACGTGGTCTT GCTGCAACAA TTGAAGATTG GTTAAACGCT
TCTGAGTACA TTATATCGGA AGGTAATCCA AATGTAGTCT TATGTGAGCG AGGTATACGT
ACCTTTGAAA CCGCAACAAG AAATACTTTA GATATTAGTG CGGTTCCTGT TATTAAGCAC
AAGAGTCACC TGCCAATCAT TGTGGATCCA AGTCATGCAA CCGGAGTTAG ACGTTATATC
GCTCCTCTTG CAAAATGTGC GATTGCTGCA GGTGCTGATG GATTAATGAT TGAAACACAT
CCAGATCCAG CTACTGCACT TTCTGATGGG CCACAGTCAT TAACCTTTGA TCAATTCGAT
GAACTTTGCA ATGAATTACG TCCATACGCT AAGTTGGCAG GAAAACGCTT CTAG
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| Protein sequence | MIIVMKPNAK KESIDNILRL IKEKGLDVHI SAGKEVTIIG VIGDKSKLSC CNLEIAEDVD
HILPVTESYK LANKKFHPEP TIVKVGNTTI GGDELCVMSG PCAVESAHQV LETAIAIKKS
GATILRGGAY KPRTSPYSFQ GLEEEGLKYM KEAREATGLA VVCEVTSLAA IEAAVKYVDM
LQIGARNMQN FYLLKEAGKT GLPVLLKRGL AATIEDWLNA SEYIISEGNP NVVLCERGIR
TFETATRNTL DISAVPVIKH KSHLPIIVDP SHATGVRRYI APLAKCAIAA GADGLMIETH
PDPATALSDG PQSLTFDQFD ELCNELRPYA KLAGKRF
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