Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2534 |
Symbol | |
ID | 5742605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3102399 |
End bp | 3103187 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641293624 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_001559634 |
Protein GI | 160880666 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTT CAAAGAAATT TTCCCTTGAA GGTAAAATCG CTTTAGTAAC CGGTGCTTCT TATGGTATCG GATTTGCTAT TGCTAGCGCA TATGCAGAAG CTGGCGCTAC TATAGTTTTC AACGATATCA AGCAGGAATT AGTAGACAAC GGAATCGCTG CTTACAAAGA AGCTGGTATC ACTGCTCACG GCTATGTTTG TGACGTAACA AACGAAGATC AAGTAAATGC AATGGTCGCT CAGATCGAGA AGGAAGTTGG CGTTATCGAC ATCTTAGTTA ACAATGCAGG TATTATCAAG CGTATCCCTA TGATTGAAAT GACAGCTGCT GAATTCAGAC AAGTTATCGA TGTAGATTTA AATGCTCCTT TCATCATGGC TAAAGCTGTT ATTCCTAGCA TGATTAAGAA GGGTCATGGA AAGATTATCA ACATCTGTTC TATGATGAGT GAATTAGGTC GTGAGACTGT ATCCGCTTAT GCTGCAGCAA AGGGTGGTCT TAAGATGTTA ACTAAGAACA TTGCATCTGA ATATGGTGAA TTCAACATTC AGTGTAATGG TATTGGACCT GGATACATCG CTACTCCTCA GACAGCTCCT CTTCGTGAAG ATGGTCATCC ATTCAACAAC TTTATTATCT CAAAGACTCC AGCTGCTCGT TGGGGTGAGC CAGAAGATTT AGCTGGTCCA TCTGTATTCT TAGCTTCTGA TGCATCTGAC TTCGTAAATG GTCACATCCT TTACGTAGAC GGTGGTATCT TAGCATACAT CGGAAAACAG CCTAAGTAA
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Protein sequence | MDFSKKFSLE GKIALVTGAS YGIGFAIASA YAEAGATIVF NDIKQELVDN GIAAYKEAGI TAHGYVCDVT NEDQVNAMVA QIEKEVGVID ILVNNAGIIK RIPMIEMTAA EFRQVIDVDL NAPFIMAKAV IPSMIKKGHG KIINICSMMS ELGRETVSAY AAAKGGLKML TKNIASEYGE FNIQCNGIGP GYIATPQTAP LREDGHPFNN FIISKTPAAR WGEPEDLAGP SVFLASDASD FVNGHILYVD GGILAYIGKQ PK
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