Gene Cphy_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2531 
Symbol 
ID5742602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3100150 
End bp3100587 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content37% 
IMG OID641293621 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001559631 
Protein GI160880663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TAGTAATCAA CGGTCCGAAC ATTAATTTCT TAGGAATAAG AGAAAAAGCC 
ATCTATGGGA AAGAGGATTA TCCTTATTTG CTTTCTTTAC TTGAGGGAAA GGCGAAAAAA
GAAGGAATTG AGATTGTAAC TTTCCAAAGT AATGGGGAAG GTGAAATCAT AGACCGAATT
CAGGAAGCAT ATTCGGATCA AACGGATGCG ATTATAATAA ATCCAGGTGC ATATACCCAT
TATAGTTATG CAATTCGTGA CGCTCTAGCC TCTATTGAAA TACCCAAAAT AGAAGTACAT
ATCTCCAATG TACATAAACG AGAAGAGTTT CGCCATGTAT CCGTAACAGC TCCTGTGTGT
ACTGGTCAGA TTGTTGGACT AGGTTTGCAA GGGTACTTAT TAGCCATAGA TGCCATAATT
TCCATGAACA TCGGTTAA
 
Protein sequence
MKILVINGPN INFLGIREKA IYGKEDYPYL LSLLEGKAKK EGIEIVTFQS NGEGEIIDRI 
QEAYSDQTDA IIINPGAYTH YSYAIRDALA SIEIPKIEVH ISNVHKREEF RHVSVTAPVC
TGQIVGLGLQ GYLLAIDAII SMNIG