| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2510 |
|---|
| Symbol | |
|---|
| ID | 5742581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3083087 |
|---|
| End bp | 3083887 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641293600 |
|---|
| Product | hemolysin A |
|---|
| Protein accession | YP_001559610 |
|---|
| Protein GI | 160880642 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1189] Predicted rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000179539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC GTCTGGATGT TCTGCTGGTA GCTAGAAATC TGGCAGAATC AAGAGAAAAA
GCGAAAGCAA TCATAATGTC TGGGAATGTT TATGTTGACG GTCAAAAGGA AGATAAAGCT
GGGAGCATGT TTAAACCAGA AGTTTCGATT GAAGTGAAAG GTACTGCGAT GAAGTATGTA
AGTCGCGGTG GTTATAAATT AGAAAAAGCA ATAGAAGAAC ATCAACTTTC CTTAGAGGGA
AAGGTATGTA TGGATGTAGG TTCTTCTACT GGTGGGTTTA CGGACTGTAT GCTACAAAAC
GGTGCTACAA AGGTATTTGC CGTAGATGTT GGAACCAATC AACTTGCCTG GAAATTAAGG
CAGGATGAGC GAGTGATTTC CATGGAGAAA ACCAACATCC GCCACGTAAC ACCGGAAGAC
ATCAAGGAAC AAGTGGATTT TGTCTCCATT GATGTTGCCT TTATCTCCTT AACGAAAGTA
TTAGAACCTG TTCATGCGCT AATGAAAGAT GGGGCAGAAA TTGTTTGTTT AATTAAGCCA
CAGTTTGAGG CTGGAAGAGA AAAGGTTGGG AAAAAGGGAG TTGTTCGTGA GCCAAAGGTT
CATGAAGAAG TTATTGAGAT GGTCATGAAT TATGCGAATA CCCTAGGATT TGTATTGATA
CACCTAGACT ATTCCCCTAT TCGTGGTCCA GAAGGAAATA TCGAATATTT ACTTCATATG
AGAAAGTCGC AGTCAGAGGA TATTAGCACA CTCTTACAAA GTGTTCCTGA GATTGTATCA
AGAGCTCATC AGTCATTATA A
|
|---|
| Protein sequence | MKERLDVLLV ARNLAESREK AKAIIMSGNV YVDGQKEDKA GSMFKPEVSI EVKGTAMKYV
SRGGYKLEKA IEEHQLSLEG KVCMDVGSST GGFTDCMLQN GATKVFAVDV GTNQLAWKLR
QDERVISMEK TNIRHVTPED IKEQVDFVSI DVAFISLTKV LEPVHALMKD GAEIVCLIKP
QFEAGREKVG KKGVVREPKV HEEVIEMVMN YANTLGFVLI HLDYSPIRGP EGNIEYLLHM
RKSQSEDIST LLQSVPEIVS RAHQSL
|
|---|
| |