| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2493 |
|---|
| Symbol | |
|---|
| ID | 5742564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3059669 |
|---|
| End bp | 3062047 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641293583 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001559593 |
|---|
| Protein GI | 160880625 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATG CAGATATTAT AGTGGACATA TCAGTAGAAA ATCTGGATAA AACCTACCAA
TACAGCATAC CGCCTGCTCT TTGTGCGGAT GCTGTTATTG GCGTGCCAGT AACTATACCA
TTTGGCAATG GGAATCGTAG CATCAGTGGG TTTATTGTTG GACTATCTGA TGTACCCAAG
ATTGCTCCAG AGAGAATAAA ATCCATACTT GGAATTAAAG ATAAAGGGCT ACCAATCGAA
GGACAGATGA TAGCCCTTGC TGCATTTGTG AAAGAGCAAT ATGGCGGTAC GATGAATGAT
GCCTTAAAGA CAGTAATTCC AGTGAAAAAA AGTGTGAAGC AGATTGAAAA ACGAATCGTA
TCGTCAGCTG TGTCAAAAGA AAAGTTACAG GACGCATATA TTGAAGCGGA AAAGAAAAAG
CATAAAGCGA AAGCAAGACT ATTATTGGCT CTTATGAATA GCGAAGAAAT TGAGTTTGAG
GATATTGTCA ATAAATTAAA TATCTCAAGA ACAACCATTA ATTCCTTAAA GGAAAGTGGA
ATCATTCAAA TTGAATCAGA GACAAAGTAT CGTAATCCAA TTGCTTCAAA GACGACGGAT
AGTTACAGTA TCTCTTTAAA TTATGAACAG CAAGAAATAG TGTCTAAGGT TTTAAAGGAT
TATGAAGAAG GGATACGAAA AACTTATTTA ATCCACGGTA TTACAGGCAG CGGTAAAACA
GAAGTATATA TGGGAATTAT CGACCAAGTA ATACAATCTG GTAGACAGGT TATTATGTTA
ATTCCTGAAA TTGCGCTTAC GTATCAGACT GTAGTACGTT TTTACAAAAG ATTTGGTAAT
CGTATCTCTA TTCTAAACTC TAAGATGTCT GCTGGAGAAC GATACGATCA AATTGAACGA
GCAAAAAATG GCGATATCGA TATCATGATT GGTCCTAGGT CTGCTTTATT TACGCCGTTT
AAAGACCTAG GTTTGATTAT TATAGATGAA GAGCATGAAA CAAGTTATAA AAGTGAGATG
CCTCCGAAAT ATCATGCAAG AGAAGTGGCG ATTAAGAGAG GCGAACTAAG CAATGCTTCC
ATCATCCTTG GTTCTGCAAC CCCATCTCTG GAAGCATATA AAAAAGCAAT GGACGGAGAA
TTTGAGCTAT TTCATTTAAC GAAAAGAGCA AAAGAAGCAA AAGTTCCGAT GGTTTCCATT
GTTGATTTAA AAGAAGAATT AAAGAAGAAA AACAAATCCA TCTTTAGTGA TCTGTTACGA
AGCTTAATTG AAGATCGTTT AAGAAAAAAA GAACAGATTA TGTTATTTTT AAACCGAAGA
GGATACGCAG GTTTTGTGTC ATGTCGAAGT TGTGGTACTG CAATGAAATG TCCTCATTGC
GATATTTCCT TGACGGCACA TAGTACTGGT GTGTTAAAAT GTCATTATTG CGGATATGAA
ATTCCGACCC CAAACATTTG TCCGGTCTGT GGTTCTAAGT ATATTGCTGC TTTTGGAACA
GGAACGCAGA AAGTTGAGGC GATGGTATTA AAGGAATTTC CGACGGCTAG AGTTCTACGT
ATGGATGCGG ATACTACGAA GAACAAACTA AGTTATGAAG AAATTTTAAG TTCATTTGCA
AATGGTGAAG CAGATATCCT GATTGGAACT CAGATGATTG TAAAGGGGCA TGATTTTGCC
GGAGTAACTC TAGTGGGTAT TTTAGCTGCG GATTTATCAC TTTATGCAAA TGATTATCGG
GCAGCAGAGC GAACATTTCA GTTGTTAGCA CAAGCAGCAG GTCGTGCAGG ACGTGGTGAA
CTGATCGGAG AGGTTGTGAT ACAAACCTAT CAACCAGAGC ATTATGCAGT AACCACTGCG
GCGACAGAAG ATTATGTTGC TTTTTATGAG CAGGAGATGA ATTACAGGCG TCTTATGAAG
TATCCTCCTG CTGCGCACAT TATGGCTATT TTGATTCAGT CAAAAGAGGA GGAAGTTGTT
ATCCTTGCAG CGGATCTTTT GGCTGGGGCA GTGAAAGAAT GGTTAAAGGC GAAGGTAGAA
TTAATTAACC AAGATAAACC TGATGAACAA AATAAGTTTA TTGAACAAGG AAAGTTTGAG
TTCAAGGAAC AAGATAAGTT CAAGGAACAA GGAAAAATTG AAAATTATTT GGAAAACAAT
GAGCAAGATG ATAATAAGCC TAATATTAGT ATTATCGGGC CTGCGCCTGC TGGAATTGCA
AAAATGAATG ATATTTATCG AAGAGTTTTA TATCTAAAAG AAGAACAATA TGAGTATCTT
GTTGAAGTAA AGGACTTTTT AGAACAGTAC ATTACAGTTT CAGAGTATTT TAAAAAGTGT
AATGTACAAT TTGATTTTGA TCCAATGAAC AGTTATTAA
|
|---|
| Protein sequence | MQYADIIVDI SVENLDKTYQ YSIPPALCAD AVIGVPVTIP FGNGNRSISG FIVGLSDVPK
IAPERIKSIL GIKDKGLPIE GQMIALAAFV KEQYGGTMND ALKTVIPVKK SVKQIEKRIV
SSAVSKEKLQ DAYIEAEKKK HKAKARLLLA LMNSEEIEFE DIVNKLNISR TTINSLKESG
IIQIESETKY RNPIASKTTD SYSISLNYEQ QEIVSKVLKD YEEGIRKTYL IHGITGSGKT
EVYMGIIDQV IQSGRQVIML IPEIALTYQT VVRFYKRFGN RISILNSKMS AGERYDQIER
AKNGDIDIMI GPRSALFTPF KDLGLIIIDE EHETSYKSEM PPKYHAREVA IKRGELSNAS
IILGSATPSL EAYKKAMDGE FELFHLTKRA KEAKVPMVSI VDLKEELKKK NKSIFSDLLR
SLIEDRLRKK EQIMLFLNRR GYAGFVSCRS CGTAMKCPHC DISLTAHSTG VLKCHYCGYE
IPTPNICPVC GSKYIAAFGT GTQKVEAMVL KEFPTARVLR MDADTTKNKL SYEEILSSFA
NGEADILIGT QMIVKGHDFA GVTLVGILAA DLSLYANDYR AAERTFQLLA QAAGRAGRGE
LIGEVVIQTY QPEHYAVTTA ATEDYVAFYE QEMNYRRLMK YPPAAHIMAI LIQSKEEEVV
ILAADLLAGA VKEWLKAKVE LINQDKPDEQ NKFIEQGKFE FKEQDKFKEQ GKIENYLENN
EQDDNKPNIS IIGPAPAGIA KMNDIYRRVL YLKEEQYEYL VEVKDFLEQY ITVSEYFKKC
NVQFDFDPMN SY
|
|---|
| |