Gene Cphy_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2484 
Symbol 
ID5742555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3049599 
End bp3050261 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID641293574 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001559584 
Protein GI160880616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCATT TATCACCCTC AATCCTAGCA GCAGATTTTA GTGCTTTAGG CGAGAATATT 
AGAAAGGCGG AGGAAGCAGG AGCAACTTAT CTGCATTTGG ATGTTATGGA TGGGAATTTT 
GTCCCTAGCA TTTCATTTGG TATGCCGGTA ATAACTTCTC TACGTGATAA ATCTTCCATG 
GTATTTGATG TGCACTTAAT GATCGAAGAG CCCATTCGTT ATATCGAGGA TTTTGCAAAA 
GCAGGTGCTG ATATTATTAC GGTACATGCA GAGAGTTGTA AACATCTTCA TCGCACAGTG 
ACTGCAGTGA AGGAGCTTGG AAAAAAGGTT GGTGTTGCAT TAAACCCAAG TACACCATTA 
TCCGTCCTTG ATTATATCTT ACCAGAACTT GATATGGTGT TAATCATGTC AGTTAATCCA 
GGCTTTGGAG GTCAGAAATT TATCCCCTCA ACACTTCAAA AATTAAGAGA CCTAAAGAAG 
ATGGCGAATG ATTTAAACGT TACGATTGAC ATTGAGGTAG ACGGTGGAGT AACCTTAGAA 
AATGTATCGG AAATCATGGA AGCTGGTGCT AATGTATTAG TTGCCGGAAC TTCTGTTTTC 
CGTGGTGATA TAGAAAAGAA CGTAGAAGGA TTTCTTAATA TATTTCAAAC TAATCAGAAA 
TAG
 
Protein sequence
MYHLSPSILA ADFSALGENI RKAEEAGATY LHLDVMDGNF VPSISFGMPV ITSLRDKSSM 
VFDVHLMIEE PIRYIEDFAK AGADIITVHA ESCKHLHRTV TAVKELGKKV GVALNPSTPL 
SVLDYILPEL DMVLIMSVNP GFGGQKFIPS TLQKLRDLKK MANDLNVTID IEVDGGVTLE 
NVSEIMEAGA NVLVAGTSVF RGDIEKNVEG FLNIFQTNQK