Gene Cphy_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2483 
Symbol 
ID5742554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3048771 
End bp3049421 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content36% 
IMG OID641293573 
Productthiamine pyrophosphokinase 
Protein accessionYP_001559583 
Protein GI160880615 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTC TCATCATTGC GGGTGGAGAA TTTTCACCAG AAGTTGCGAT GAAAACTTTA 
GAAGAAGGTT CTTTTGACCG AATAATAGCA ATTGATAACG GGTTATCTTA TCTTCATAAT
CTTAAGATAA CTCCGACTCA TATCGTAGGT GATTTTGATA CAGTCTCCCA GGAGTTGCTA
AAAGAGTATC AAGAGGAATC TAAAGTAAAG ATAGTAACTT TATGTCCTGA AAAAGATGCA
ACTGATACAG AGGTTGCGGT AGATTTAGCT GTAGAAGAAG GATGTAAGAG TATTTTCATT
CTTGGAGCAA CAGGAGGTCG TTTTGACCAT ACCCTTGCGA ATCTTCATAT GCTATATAAA
TTATTATGTC AGGGGATACA AGCTTATCTA ATAGATAAAA ATAATAAAAT ATACCTGATA
AAGGAAAGCA TTACGCTTCT TGCTAATGAG GTGAAATCAA CTTATGTTTC CTTACTTCCT
TTTACGGAAG AAGTCACAGA AGTAACACTT CTCGGGTTTA AGTACCCACT TACGAACTAT
CACTTAACGC AAGGGACCAG TATCGGTGTC AGTAATGAAA TCATAGAAGC AAAAGCACAG
ATTTTATTTG ATAAGGGAGT TCTTATCGTA GTTGAGTCGA AGGATACTTA A
 
Protein sequence
MKALIIAGGE FSPEVAMKTL EEGSFDRIIA IDNGLSYLHN LKITPTHIVG DFDTVSQELL 
KEYQEESKVK IVTLCPEKDA TDTEVAVDLA VEEGCKSIFI LGATGGRFDH TLANLHMLYK
LLCQGIQAYL IDKNNKIYLI KESITLLANE VKSTYVSLLP FTEEVTEVTL LGFKYPLTNY
HLTQGTSIGV SNEIIEAKAQ ILFDKGVLIV VESKDT