Gene Cphy_2475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2475 
Symbol 
ID5742546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3038345 
End bp3039709 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content37% 
IMG OID641293565 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_001559575 
Protein GI160880607 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCC TTGGTAAAAA AGTATTGGTT GTTGGTGCCG GAAAAAGTGG TATCTCTGCG 
ATAGAATTAC TATCACAGGA GGGGGCACAA ACCATTCTTT ATGACGCAAA CGAAGAAATA
AACAAAGAAG AAATTAGCAA GAAACTACCT ATAGATTATA AAGGGGACAT CATACTCGGA
GGATTATCAT CTGAACTAAA ATCCGAACTT GATGTGGTTG TATTAAGTCC CGGGGTTCCA
ACAGATTTAG ATTATGTGAA AGAACTTAAG AGTGCGGAGA TACCAATCAT TGGTGAAGTT
GAACTCGCTT ATAACTTTTC GAAGGGTAAG ATAGCTGCCA TTACAGGAAC GAACGGTAAG
ACATCGACGA CAACTTTAGT AGGTGAGATT ATGAAAACCT ATTATAAAAG TGTTTTCGTC
GTTGGAAATA TCGGGGTTCC ATATACTCAG ATGGTTAAAA ATACAGAAAA CGATTCTGTT
ACAGTTGCAG AAATGAGTAG TTTTCAATTA GAAACTATTG AAACTTTTAG ACCAGACGTT
TCTGCTATTT TAAATATCAC GCCAGACCAC TTAAATCGCC ATCATACGAT GGAAGCATAT
ATTGAAGCCA AGGTAAATAT AACAAAGAAC CAAACAAAAG AAGATACCTG TATTTTGAAT
TATGAGGATT CCTATCTTCG AACTGTAAGT GGGAGAATTC CTGCTACGAT TCTATGGTTT
TCAAGTGTAA GAGAACTTGA GAGAGGATTG TTTCTTCGAG AGAATCATAT TATTTACCGA
GATGATGAGA AAGAATGCGT TGTGTGCGAT GTGAATGAAT TACAGATCAT TGGCAAGCAT
AATTATGAAA ATGTCATGGC AGCCGTGGGA ATTGCAATTG CCTTAAAAGT TCCAATGGAT
TTTATTCGCG AAGCAGTTAC AAAATTTAGG GGAGTGGAGC ATCGTATCGA GTATGTAACT
ACGAAACGAG GAGTGAAATA CTACAATGAT TCGAAAGGAA CAAACCCAGA TGCATCCATT
CAAGCAATCA AAGCAATGCA GACCAAAACT CTTTTAATTG GTGGCGGTTA CGATAAGGAT
TCTGACTACG ATGATTGGAT TAAGGCATTT GATGATAAGG TGACCTATCT TGTATTACTT
GGTCAAACAA GAGAGAAGAT AGCAAATGCA GCAAAAAGAC TAGGTGTTAA GAATATAGTC
TTGGTTGACA GTCTAAGTGA GGCAGTTGAT TTTTGCGCGG AACACGCAGG TGTAGGGGAA
ACTGTATTAT TATCTCCATG TTGTGCAAGC TGGGGAATGT TTAAAGATTA TGAAGAACGC
GGTATGTTAT TCAAGGAATA TGTTCATGCG TTAAAAGATG AATAA
 
Protein sequence
MNFLGKKVLV VGAGKSGISA IELLSQEGAQ TILYDANEEI NKEEISKKLP IDYKGDIILG 
GLSSELKSEL DVVVLSPGVP TDLDYVKELK SAEIPIIGEV ELAYNFSKGK IAAITGTNGK
TSTTTLVGEI MKTYYKSVFV VGNIGVPYTQ MVKNTENDSV TVAEMSSFQL ETIETFRPDV
SAILNITPDH LNRHHTMEAY IEAKVNITKN QTKEDTCILN YEDSYLRTVS GRIPATILWF
SSVRELERGL FLRENHIIYR DDEKECVVCD VNELQIIGKH NYENVMAAVG IAIALKVPMD
FIREAVTKFR GVEHRIEYVT TKRGVKYYND SKGTNPDASI QAIKAMQTKT LLIGGGYDKD
SDYDDWIKAF DDKVTYLVLL GQTREKIANA AKRLGVKNIV LVDSLSEAVD FCAEHAGVGE
TVLLSPCCAS WGMFKDYEER GMLFKEYVHA LKDE