Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2469 |
Symbol | |
ID | 5742540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3031435 |
End bp | 3032175 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293559 |
Product | sporulation sigma factor SigE |
Protein accession | YP_001559569 |
Protein GI | 160880601 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000130703 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATTAA AAATCACAAT CCAAAATAAA TTTCAGTTCC GTATGATACC AAGTTTTCGT GAGTTATTCT TGAAGAAAAA AGGGGAAATT CACTATATTG GGGGTGCTGA AGTTTTGCCG GCTCCTTTGG ATGCCAAGAG AGAAGCAGAT GCAATTATGA AACTTGGTAC ACCGGATGAT GTGGAGGCGA AATCATTACT AGTAGAACAT AACTTAAGGC TGGTAGTTTA CATAGCAAAA AAATTTGATA ATACAGGCGT AGGGGTAGAG GATTTAATCT CAATAGGGAC GATTGGGCTA ATTAAGGCGA TAAACACGTT TAATCCGGAT AAAAATATTA AATTGGCTAC TTATGCCTCT CGTTGCATCG AAAATGAAAT CCTGATGTAT TTACGTAGAA ATAGTAAAAC AAAGCTTGAG GTATCTATTG ATGAGCCGCT TAATGTAGAT TGGGACGGTA ATGAATTGTT ATTGTCTGAT ATCCTTGGTA CGGAGGAAGA TGTAATATAC AAAAACATAG AAGACGAAGT CGATAAGAAA CTCCTTGGTA GAGCACTTTC TAAATTAAAT GACCGTGAAA AAATTATAGT TTCGTTACGA TTTGGTTTAA ACACTGCAGA TGGTAACGAA CGTACACAAA AAGAAGTGGC AGATATGCTA GGGATTTCGC AGTCTTATAT TTCTCGTTTG GAGAAGAAGA TAATTAAGCG TTTAAAAAAG GAAATGCTAC GATGTGAATA A
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Protein sequence | MLLKITIQNK FQFRMIPSFR ELFLKKKGEI HYIGGAEVLP APLDAKREAD AIMKLGTPDD VEAKSLLVEH NLRLVVYIAK KFDNTGVGVE DLISIGTIGL IKAINTFNPD KNIKLATYAS RCIENEILMY LRRNSKTKLE VSIDEPLNVD WDGNELLLSD ILGTEEDVIY KNIEDEVDKK LLGRALSKLN DREKIIVSLR FGLNTADGNE RTQKEVADML GISQSYISRL EKKIIKRLKK EMLRCE
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