Gene Cphy_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2443 
Symbol 
ID5742514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2997461 
End bp3001018 
Gene Length3558 bp 
Protein Length1185 aa 
Translation table11 
GC content36% 
IMG OID641293533 
Productchromosome segregation protein SMC 
Protein accessionYP_001559543 
Protein GI160880575 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.211812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTAA AAAGTATTGA GGTTCATGGA TTTAAATCGT TTGCAAATAA AATAACATTT 
CAATTTAAAA ATGGGATTAC TGGTATTGTT GGACCAAATG GCAGTGGTAA AAGTAATGTT
GCAGATGCGG TTCGTTGGGT TTTGGGTGAA CAAAGTGCAA AATCGCTCCG TGGTGCCAAT
ATGCAGGATG TTATTTTTTC AGGAACTCAG ATGAGAAAGT CACTAGGTTT CGCCTATGTA
GCGATTACTT TGGATAATTC CGATCATAAA CTGCCAATTG AATACGAAGA GGTAACTGTA
TCAAGACGTG TCTATCGTTC TGGAGAAAGT GAGTACATGA TTAATGGTAC AAACTGTAGA
TTACGCGATG TACAAGAACT ATTTATGGAT ACTGGTATTG GTAAAGAAGG GTATTCTATC
ATTGGTCAGG GACAAATTGA TAAGATTTTA AGTGGTAAGC CAGAAGAGAG AAGAGAGCTC
TTTGATGAAG CTGCCGGTAT AGTGAAGTTT AAAAAAAGAA AGGCGTTAGC AGAACGGGAT
CTTGAAGCAG AACGATTAAA TCTATCTCGT GTTTCCGATA TTATTTCTGA AATAGAAAGA
CAGATTGGAC CACTTGCAAA ACAATCGGAA GTCGCAAAAG AATATCTACG CCTAAAGGAA
CAACTAAAAA CATTAGAAGT AAATCAGTTT TTAATCGAAT ATGAGAAAAA CAACCAGTTA
AAGATTGAGG TTGATAATAA ATCACAAATT GTAACAGAGG ATTTTAACCA AACCCAGACG
AAGTTTGATA ATATCAAGAT AGAGTATGAA AAGCTCGAAG AAGATTTGGA ACAGTTAGGG
GAAGAACTGG AGCTAGCGAA ATCATGTAAA AGTGAGTTAC AACTTAGCAT TGAAAAGACC
GACGGAGAGA TTAAGGTTTT AAGAGAACAG GTTGCTTCCA TAACACAGAA TGAAAACTCA
TTTCAATCTC GAATTGATTC TTTACGAGCA AATTCAGAGA ATAAGCTGAA TGAATTAGAA
GGTTATCGTA AAGAAAAACA GGATATCGAT GAAAAATTAC GTGGATTAGC GGAAAAGAAA
TCGCGTAGTA GTGAAGCTAT ATTGCAGATT GAAGCACGTA TACAAGAGTT TACGAGAGAA
ATTGAATCTT GTAACAATGA GATTTTCCGA ATCTTAAATG AAAATTCGAA CATAAAGACA
AACCTTCAAC GATATGAAAC TATAAATGAG CAAAACTCGA TTAAAAAAGC AGAGATTAAT
CAAAAGATCC TAAAGATAAA AAGTGAAGAG TCGTCTCTAA GCATCCGATT AGAGGAATTA
AAATCAAATG CAGCTCATAT TATGGAACAG ATAGACACTG TTACTGCGGA GAACCAAAAT
CTAGTTAAGC AAATCGAAGA ACTTCAAAAG AAAATCGACC AAGGAGTTGC GGTATCGAAT
CAGAAGAATC AATCGTATTT ATCCATGAAC GCGAAACTGG ATTCCCTTAA AAATTTAACA
GAACGATATG ATGGTTATGG TAATAGTATT CGTCGTATTA TGGAACAAAA GGATCAAGAA
CCTGGTATCG TTGGTGTCGT TGCTGATATT ATTAAAGTGG ACAAGAATTA CGAAACTGCA
ATTGAGACTG CACTTGGCGG TAATATCCAA AATATTGTAA CAGATAATGA GAATACGGCA
AAGAGACTGA TTGATTACTT AAAACAGGGA AAGCATGGAC GAGCTACCTT TTTACCATTA
ACCAGTATTC AAGGAAATAT TTCAGCGAAT GAACAAGTGT TAAGAGAACA GGGAGTAATT
GGTCTTGCAA ATACGCTGGT TCATGCAGAG AGTAGATTTG ATGATTTATT AAAGTATTTG
CTTGGACGAA CTTATGTCGT TGACCACATA GACCATGCGA TAGCGTTATC AAAAAAGTAT
AAGTATAGTT TACGAATTGT AACGCTTGAA GGAGAGCAAT TAAATCCAGG TGGATCACTC
TCCGGTGGTG CATATAAAAA CTCCAGTAAT TTATTATCCC GACGAAGGGA AATAGAGGAG
TTAGAGGAAA ATGTACTTAC TCTTAAAAAT GAAGTTGCGA AATTGAATGA AGATATTATT
TCCTACAAAG AGCAACGTTT TTCTATGAGA GAGACAGTGG AGGCTAACCA AAAGAGGTTA
TCTGAATTGT CAGTGGAAGC AAACACAGCG AAAATGAATT CTAGACAAGA ACAGGAAAAG
ATGGATGGTA TGCGCCATAC TTACCTGGAG TTTATGAACG AATTAAAATT AATGGAAGAG
CAAAATCAAG AACTTAAAGT TAACATGGAA AACCTTAAGA ATTCCTTGAT TGATAACGAA
AGAATTAGCA AGGAAAAAGA GCAACGAATC GAAGAGTGCA ATCAAAACCT TGCGAAAGAG
AGAGCGACAA AGCAAGGCTC CATGGATGAA GCTTCTTCTA TTTTAGTTGA ATCCTCAAAT
CTTGAACAAA GCATACAATA TGTGTTGGAA AATATGCGCC GTGTACGTCG TGATATAGAG
ACACTTGAAT TAGAGGAACA AGAGTTACGA AGAGAAGCAG AAAGCTCTAC GGAACAAAAA
AATCAGCGTG AAGAACAAAT TACGATTAGT TTAAATAAAA AACAAGAGGA TTTGGAACGA
CTTCATATAC TGGAAGAAAA GATTACAAAG GCAAGTGAAC AAAAGGATAT CATGAGCCAA
AATCATAAAC AATTTGTAAA GATCAGAGAA GAACTTCAGA ACCGTATCTC GCTTCTTGAT
AAAGAAACAT TTCGACTTCA AAATCAAAAG GAAAAATTAA CCGAGATTTT GGATGCACAA
ATAAGCTATA TGTGGGAAGA ATATGAATTG ACAGTTAGCA CAGCCACAGA GTATCAGGAA
GAAGAATTAA GCAATCCTGT TACCAATAAA AAAGGAATTA CAGAGCTTAA AAATAGTATT
AAGACCTTAG GTGATGTTAA CGTCAATGCT ATTGAAGATT ATAAGAATCT TTCCGAGCGT
TATGAATTTT TAACGACTCA AAAAGCTGAT TTAATATCTG CAGAAGAAAC TCTTATGGGA
ATTATCAATG AGCTTGATGA AGAAATGAGA AGGCAGTTTG AAGAAAAGTT TGCCGATATT
AAAGAACAAT TCGATATTGT ATTTAGGGAA CTTTTCGGTG GTGGTAAAGG TACACTGGAG
CTTACGGAGG ATGAGGATAT CTTAGAAGCT GGAATCCGAA TCATCGCGCA ACCTCCAGGA
AAGAAGTTAC AGAATATGAT GCAGCTATCT GGTGGAGAAA AGGCACTTAC CGCGATCTCT
CTTTTATTTG CAATTCAAAA CCTAAAACCA TCCCCATTTT GTCTACTCGA TGAGATTGAG
GCAGCACTTG ATGATTCTAA TGTAAAACGA TATGCGAACT ATCTTCATAA ACTTACGAAA
GATACGCAGT TTATCATTAT TACACACCGT AGAGGAACCA TGGCAGCAGC TGATGTATTA
TATGGTATCA CCATGCAGGA AAAAGGTGTT TCGACATTAG TAAGTGTGAG TCTTATTGAA
GATAATTTAG ATAGTTAG
 
Protein sequence
MYLKSIEVHG FKSFANKITF QFKNGITGIV GPNGSGKSNV ADAVRWVLGE QSAKSLRGAN 
MQDVIFSGTQ MRKSLGFAYV AITLDNSDHK LPIEYEEVTV SRRVYRSGES EYMINGTNCR
LRDVQELFMD TGIGKEGYSI IGQGQIDKIL SGKPEERREL FDEAAGIVKF KKRKALAERD
LEAERLNLSR VSDIISEIER QIGPLAKQSE VAKEYLRLKE QLKTLEVNQF LIEYEKNNQL
KIEVDNKSQI VTEDFNQTQT KFDNIKIEYE KLEEDLEQLG EELELAKSCK SELQLSIEKT
DGEIKVLREQ VASITQNENS FQSRIDSLRA NSENKLNELE GYRKEKQDID EKLRGLAEKK
SRSSEAILQI EARIQEFTRE IESCNNEIFR ILNENSNIKT NLQRYETINE QNSIKKAEIN
QKILKIKSEE SSLSIRLEEL KSNAAHIMEQ IDTVTAENQN LVKQIEELQK KIDQGVAVSN
QKNQSYLSMN AKLDSLKNLT ERYDGYGNSI RRIMEQKDQE PGIVGVVADI IKVDKNYETA
IETALGGNIQ NIVTDNENTA KRLIDYLKQG KHGRATFLPL TSIQGNISAN EQVLREQGVI
GLANTLVHAE SRFDDLLKYL LGRTYVVDHI DHAIALSKKY KYSLRIVTLE GEQLNPGGSL
SGGAYKNSSN LLSRRREIEE LEENVLTLKN EVAKLNEDII SYKEQRFSMR ETVEANQKRL
SELSVEANTA KMNSRQEQEK MDGMRHTYLE FMNELKLMEE QNQELKVNME NLKNSLIDNE
RISKEKEQRI EECNQNLAKE RATKQGSMDE ASSILVESSN LEQSIQYVLE NMRRVRRDIE
TLELEEQELR REAESSTEQK NQREEQITIS LNKKQEDLER LHILEEKITK ASEQKDIMSQ
NHKQFVKIRE ELQNRISLLD KETFRLQNQK EKLTEILDAQ ISYMWEEYEL TVSTATEYQE
EELSNPVTNK KGITELKNSI KTLGDVNVNA IEDYKNLSER YEFLTTQKAD LISAEETLMG
IINELDEEMR RQFEEKFADI KEQFDIVFRE LFGGGKGTLE LTEDEDILEA GIRIIAQPPG
KKLQNMMQLS GGEKALTAIS LLFAIQNLKP SPFCLLDEIE AALDDSNVKR YANYLHKLTK
DTQFIIITHR RGTMAAADVL YGITMQEKGV STLVSVSLIE DNLDS