Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2429 |
Symbol | |
ID | 5742500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2980255 |
End bp | 2982114 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293519 |
Product | ABC transporter related |
Protein accession | YP_001559529 |
Protein GI | 160880561 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.572705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTGA AGAAAAACAG AAAGGCTACT GATTCTATGG AAAAGAAGAG AACCAGAAAA ACTTCAGATT TGATGGAAAC GAATAAAACC AGAAAAGCTA CCGATCCCAT GGAAAAGAAG AAAACTACAC AAAAACAAGC GATTAGAAAG GTTTTAAGAT ATGTAAAGCG CTATTGGATT TTTCTTCTTA TTTCATTAAT ACTGGCGCTT ATCACAGTTG CTTTAACACT TTATGTACCG ATTGAAATAG GAAAAGCAAT TGATGAAATT GTTTATGGCA GTGTGAATTT TCCTGTAATA CGTGATATTT TGTTACGAGT TGCAATTATT GTTGGAGTCA CCGCTGTTGC CCAGTGGTTC ATGAGTATTT TAAATAATAA GGTGACATAT GAGGTTGTTA GAGATATTCG TGAGGAAGCT TTTGAGAAAA TTGAAGTCTT ACCGCTAAAA TATTTAGATT CTCATCCATC CGGTGAGATT GTCAGCCGAA TGATTGCGGA TGTCGAACAA TTTGCAGATG GACTTCTTAT GGGGTTTACT CAAGTTTTTA CAGGAATTAT GACAATCATC GGAACATTAT TCTTTATGCT TCGTTTAAAT ATTGGTATTA CGCTATTTGT TGTCTTACTA ACTCCAATCT CACTCTTTGT GGCAAATTTT ATAGCAAAGA GAACCTACGC TATGTTTCAG GCACAATCAA GGACACGAGG AGAGCAAACT ACCCTGATTG ATGAGATGTT AGGTAATGAG AAAGTAGTAA AGGCATATAA TCAAGAAGAA GAGGTCATTA AGCGATTTGA TGAAGTAAAT GAACGGTTAG AGAAGTACTC TTTGCGTGCA ATCTTTTATT CCTCGATAAC AAATCCAGCT ACAAGATTTA TAAATGCAGT GGTTTATGCA GGGGTAGGAC TAACGGGAGC GTTTGCGGTA ATCAGAGGAA CTATGACGGT AGGTGCATTA TCCAGCTTCT TAAGTTACTC CAATCAATAT ACGAAACCAT TTAATGAAAT CTCAGGAGTT ATTACGGAAC TGCAGAATGC AATCGCTTGT GCCGCACGTA TCTTTGAATT ATTAGAAGAA CCCGTTGAAA TCCCAGATAG TAAAAATGCG GTGATATTAA CAGATGTAAA AGGCAACGTG GTATGCAATG AGGTCAATTT CTCTTACGAT AAATCGAAAA AGTTGATTGA AAACCTAAAC CTAAAAATTC ATCCGGGGCA AAAGATAGCT ATTGTTGGAC CAACGGGGTG TGGAAAGACA ACAATCATAA ATTTATTAAT GCGTTTTTAT GAAGTAGATC ATGGAGCTAT CTTGGTTGAG GGTGAGGAAA TTAGGAATAT AACGAGGAAC AGTCTTCGCG AAAGCTATGG TATGGTTTTA CAGGATACTT GGTTAAAGGC TGGAACAATT CTCGAAAATA TAAAGATGGG AAAAGAAGAT GCAACCAGGG AAGAAGTAAT CAGTGCCGCG AAGGAGGCTC ATGCGCATTC CTTTATTAAA AGGTTGCCAA AGGGTTACGA TACTGTCATA GGAGAAGACG GCGGTATGCT ATCTCAGGGG CAAAAACAGC TTCTTTGTAT TTCTAGAGTA ATGCTTAGTG TGCCACCTAT CCTAATCCTT GATGAAGCTA CGTCCTCAAT TGATACGAGA ACAGAGGTTA AGATACAAAG TGCTTTCCAG AAACTGATGC AGGGAAGAAC AACTTTTATC GTTGCTCATC GATTATCAAC AATACAAAAT GCAGATGTTA TTCTTGTAAT GAAAAATGGA AATATTATAG AACAAGGTAG TCATGAGGAA CTTTTAGCAA AGAAGGGCTT TTATAAAGAG TTATATGAGA GCCAGTTTGC TGCTTCTTAG
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Protein sequence | MNVKKNRKAT DSMEKKRTRK TSDLMETNKT RKATDPMEKK KTTQKQAIRK VLRYVKRYWI FLLISLILAL ITVALTLYVP IEIGKAIDEI VYGSVNFPVI RDILLRVAII VGVTAVAQWF MSILNNKVTY EVVRDIREEA FEKIEVLPLK YLDSHPSGEI VSRMIADVEQ FADGLLMGFT QVFTGIMTII GTLFFMLRLN IGITLFVVLL TPISLFVANF IAKRTYAMFQ AQSRTRGEQT TLIDEMLGNE KVVKAYNQEE EVIKRFDEVN ERLEKYSLRA IFYSSITNPA TRFINAVVYA GVGLTGAFAV IRGTMTVGAL SSFLSYSNQY TKPFNEISGV ITELQNAIAC AARIFELLEE PVEIPDSKNA VILTDVKGNV VCNEVNFSYD KSKKLIENLN LKIHPGQKIA IVGPTGCGKT TIINLLMRFY EVDHGAILVE GEEIRNITRN SLRESYGMVL QDTWLKAGTI LENIKMGKED ATREEVISAA KEAHAHSFIK RLPKGYDTVI GEDGGMLSQG QKQLLCISRV MLSVPPILIL DEATSSIDTR TEVKIQSAFQ KLMQGRTTFI VAHRLSTIQN ADVILVMKNG NIIEQGSHEE LLAKKGFYKE LYESQFAAS
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