Gene Cphy_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2429 
Symbol 
ID5742500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2980255 
End bp2982114 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content37% 
IMG OID641293519 
ProductABC transporter related 
Protein accessionYP_001559529 
Protein GI160880561 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.572705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGA AGAAAAACAG AAAGGCTACT GATTCTATGG AAAAGAAGAG AACCAGAAAA 
ACTTCAGATT TGATGGAAAC GAATAAAACC AGAAAAGCTA CCGATCCCAT GGAAAAGAAG
AAAACTACAC AAAAACAAGC GATTAGAAAG GTTTTAAGAT ATGTAAAGCG CTATTGGATT
TTTCTTCTTA TTTCATTAAT ACTGGCGCTT ATCACAGTTG CTTTAACACT TTATGTACCG
ATTGAAATAG GAAAAGCAAT TGATGAAATT GTTTATGGCA GTGTGAATTT TCCTGTAATA
CGTGATATTT TGTTACGAGT TGCAATTATT GTTGGAGTCA CCGCTGTTGC CCAGTGGTTC
ATGAGTATTT TAAATAATAA GGTGACATAT GAGGTTGTTA GAGATATTCG TGAGGAAGCT
TTTGAGAAAA TTGAAGTCTT ACCGCTAAAA TATTTAGATT CTCATCCATC CGGTGAGATT
GTCAGCCGAA TGATTGCGGA TGTCGAACAA TTTGCAGATG GACTTCTTAT GGGGTTTACT
CAAGTTTTTA CAGGAATTAT GACAATCATC GGAACATTAT TCTTTATGCT TCGTTTAAAT
ATTGGTATTA CGCTATTTGT TGTCTTACTA ACTCCAATCT CACTCTTTGT GGCAAATTTT
ATAGCAAAGA GAACCTACGC TATGTTTCAG GCACAATCAA GGACACGAGG AGAGCAAACT
ACCCTGATTG ATGAGATGTT AGGTAATGAG AAAGTAGTAA AGGCATATAA TCAAGAAGAA
GAGGTCATTA AGCGATTTGA TGAAGTAAAT GAACGGTTAG AGAAGTACTC TTTGCGTGCA
ATCTTTTATT CCTCGATAAC AAATCCAGCT ACAAGATTTA TAAATGCAGT GGTTTATGCA
GGGGTAGGAC TAACGGGAGC GTTTGCGGTA ATCAGAGGAA CTATGACGGT AGGTGCATTA
TCCAGCTTCT TAAGTTACTC CAATCAATAT ACGAAACCAT TTAATGAAAT CTCAGGAGTT
ATTACGGAAC TGCAGAATGC AATCGCTTGT GCCGCACGTA TCTTTGAATT ATTAGAAGAA
CCCGTTGAAA TCCCAGATAG TAAAAATGCG GTGATATTAA CAGATGTAAA AGGCAACGTG
GTATGCAATG AGGTCAATTT CTCTTACGAT AAATCGAAAA AGTTGATTGA AAACCTAAAC
CTAAAAATTC ATCCGGGGCA AAAGATAGCT ATTGTTGGAC CAACGGGGTG TGGAAAGACA
ACAATCATAA ATTTATTAAT GCGTTTTTAT GAAGTAGATC ATGGAGCTAT CTTGGTTGAG
GGTGAGGAAA TTAGGAATAT AACGAGGAAC AGTCTTCGCG AAAGCTATGG TATGGTTTTA
CAGGATACTT GGTTAAAGGC TGGAACAATT CTCGAAAATA TAAAGATGGG AAAAGAAGAT
GCAACCAGGG AAGAAGTAAT CAGTGCCGCG AAGGAGGCTC ATGCGCATTC CTTTATTAAA
AGGTTGCCAA AGGGTTACGA TACTGTCATA GGAGAAGACG GCGGTATGCT ATCTCAGGGG
CAAAAACAGC TTCTTTGTAT TTCTAGAGTA ATGCTTAGTG TGCCACCTAT CCTAATCCTT
GATGAAGCTA CGTCCTCAAT TGATACGAGA ACAGAGGTTA AGATACAAAG TGCTTTCCAG
AAACTGATGC AGGGAAGAAC AACTTTTATC GTTGCTCATC GATTATCAAC AATACAAAAT
GCAGATGTTA TTCTTGTAAT GAAAAATGGA AATATTATAG AACAAGGTAG TCATGAGGAA
CTTTTAGCAA AGAAGGGCTT TTATAAAGAG TTATATGAGA GCCAGTTTGC TGCTTCTTAG
 
Protein sequence
MNVKKNRKAT DSMEKKRTRK TSDLMETNKT RKATDPMEKK KTTQKQAIRK VLRYVKRYWI 
FLLISLILAL ITVALTLYVP IEIGKAIDEI VYGSVNFPVI RDILLRVAII VGVTAVAQWF
MSILNNKVTY EVVRDIREEA FEKIEVLPLK YLDSHPSGEI VSRMIADVEQ FADGLLMGFT
QVFTGIMTII GTLFFMLRLN IGITLFVVLL TPISLFVANF IAKRTYAMFQ AQSRTRGEQT
TLIDEMLGNE KVVKAYNQEE EVIKRFDEVN ERLEKYSLRA IFYSSITNPA TRFINAVVYA
GVGLTGAFAV IRGTMTVGAL SSFLSYSNQY TKPFNEISGV ITELQNAIAC AARIFELLEE
PVEIPDSKNA VILTDVKGNV VCNEVNFSYD KSKKLIENLN LKIHPGQKIA IVGPTGCGKT
TIINLLMRFY EVDHGAILVE GEEIRNITRN SLRESYGMVL QDTWLKAGTI LENIKMGKED
ATREEVISAA KEAHAHSFIK RLPKGYDTVI GEDGGMLSQG QKQLLCISRV MLSVPPILIL
DEATSSIDTR TEVKIQSAFQ KLMQGRTTFI VAHRLSTIQN ADVILVMKNG NIIEQGSHEE
LLAKKGFYKE LYESQFAAS