| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2402 |
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| Symbol | |
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| ID | 5742472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2957572 |
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| End bp | 2958216 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641293492 |
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| Product | signal peptidase I |
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| Protein accession | YP_001559502 |
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| Protein GI | 160880534 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000528092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTATTA GTATGATGAA ATATGATTTT GATAGGGATA TCAAACGCAA AAAGCGTAAA
AAATTATATA TAAGAATCAT AATTTGGATG GTTGAGATAG TAGCAGTGAT TGCTCTTGCA
TATGCAATCA TTAATGTTGC ACTTGAGAAG ACAACGATGC TTGGGGAATC AATGGAAATT
ACCTTGCAGG ATGAGGATAA GATTGTTATA AATAAATTAG CATATAAGTT TCGTGATCCA
AAGAGATACG ATATTATTGT ATTTAAGCAA AGTGGCAATG AGCATAGTTA CTATAATATA
AAACGTGTGA TTGGTTTGCC AGGAGAGCGA GTAAAGATTT TAGATGGCGT AGTTTATGTG
AATGGTGAAG CTTTAGAGGA ACCGATGGTA GTTGATCCTA TAAGAATACC AGGCCTTGCA
GACGAAGAGT TTACCTTAGA TGAGGATGAA TTTTTTGTAC TTGGTGATAA TCGAAATAAT
AGTGAAGACA GCCGTTTCGC GAATATCGGT AATGTAGTAA AAGATGATAT TATTGGTAAG
GCATGGATTC GGTTAAATCC ATTCGGCATT GTTAATAAGA TAAATATGTA CTCAAAATCT
GTTGAGGAGA ATGTTGAGGG AGAAGGCAAA ACTTCAGGGG AGTAG
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| Protein sequence | MVISMMKYDF DRDIKRKKRK KLYIRIIIWM VEIVAVIALA YAIINVALEK TTMLGESMEI
TLQDEDKIVI NKLAYKFRDP KRYDIIVFKQ SGNEHSYYNI KRVIGLPGER VKILDGVVYV
NGEALEEPMV VDPIRIPGLA DEEFTLDEDE FFVLGDNRNN SEDSRFANIG NVVKDDIIGK
AWIRLNPFGI VNKINMYSKS VEENVEGEGK TSGE
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