Gene Cphy_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2396 
Symbol 
ID5742466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2952992 
End bp2953633 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID641293486 
Producthypothetical protein 
Protein accessionYP_001559496 
Protein GI160880528 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.104879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTT CTCCTAATGA AATACTCGAA GCCTTCCTGC TTGTAGTGGC ACTTTCCGCA 
GACACCTTTG CAGCAAGCTT CGCATACGGT ACCAACAAGA TTAAAATCGT AATGTCTTCC 
ACACTAATAA TTAACGGGAT TTGTACCTTG GCTCTAACGC TCTCCTTAGT ACTCGGAAAT 
CTGCTTCGTC CCATTCTATC TAACGATATC ACTCGCGCCG TTAGTTTTAC TGTTTTATTT 
ATCCTTGGAA TGTCGAAGCT ATTCGATAGT ACAATTAAGG CTTACATCCG AAAACATAAC 
AAATTTGAGC ACGAGTTACA CTTTTCCTTT TTATATCTTC GTTTCATTTT AAATGTGTAT 
GCAGATCCGA AGATTGCCGA TGTAAACGAA TCAAATTCTC TCTCTCCAAT GGAAGCTTTA 
TCCCTTGCTA TTGCTTTATC ATTTGATGGA TTTGCAGTTG GTCTAGGTGC AGCACTGATA 
GATATAAATG TATGGTATAT TATTATTCTG TCGTTCATTA TTGGAATCCT TGCTATTATT 
TTAGGAAGCT TCTTTGGTAA TCTGATTAGT AAAAAGATAT CCATGAACAT TTCTTGGGTA 
AGCGGTATTC TACTTTTAAT CATTGCTTTT TCAAAAATTT GA
 
Protein sequence
MAFSPNEILE AFLLVVALSA DTFAASFAYG TNKIKIVMSS TLIINGICTL ALTLSLVLGN 
LLRPILSNDI TRAVSFTVLF ILGMSKLFDS TIKAYIRKHN KFEHELHFSF LYLRFILNVY 
ADPKIADVNE SNSLSPMEAL SLAIALSFDG FAVGLGAALI DINVWYIIIL SFIIGILAII 
LGSFFGNLIS KKISMNISWV SGILLLIIAF SKI