Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2344 |
Symbol | |
ID | 5745403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2891543 |
End bp | 2893270 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293434 |
Product | alpha amylase catalytic region |
Protein accession | YP_001559444 |
Protein GI | 160880476 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.520603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAGA AAATTTTATT GTTAAGCTGT CTTATTATTG TCCTGTTAGC GGCAAGCGCA TGTAAAAAGG CTGATGTAAA TCAGAATCCG TCTGAATTAA ATCAGGATGA AAGTCAAAAG GAAAAGGAAG AAAACGATGA TGAAGGCACA CCGGAAGTGT CTCAGGATGA AACTAAGGCA GTTATTCCTT ATGACTATGT ACAGAATTTA AATATAATTG ATGATAACTA CCGTAATTTT TATGAAATAT TCGTTTACTC TTTTTATGAC AGCAACGGTG ACGGCATTGG AGATATTAAT GGTGTTATAT CAAAATTAGA CTATATTAAT GATGGCAATG ATGCGACCGA TTCAGATCTA GGCTTTAACG GGATTTGGCT AATGCCTATC ATGCCATCAA CCACATATCA CAAATATGAC GTAACGGACT ATTACAATAT TGATCCACAG TACGGGACAT TAGAGGATTT TAAAAATCTG GTTTCTGAAT GTCATAAACG TGGAATTCAT TTAATTATCG ACTTTGTATT CAATCACACC TCGGCAAAAC ATCCTTGGTT TTTAGAAGCG GTTTCCTATC TGGAAAGCTT GAAGGAGGGA GAAGAGCCTG ATTTAGAAAA ATGTCCATAT GTAGGATACT ATCATTTTAC GAAAGATTAT AACGGTAGTA AAACTTACTA TAAGGCAGGA ACTTCAAATT GGTATTACGA AGGTGTCTTC TGGGATCAGA TGCCGGATTT AGCTCTGGAA AATGAAAATG TCAGAAAAGA AATTGAGGAT ATAGCTAAAT ATTGGCTTGA CCTTGGTGTA GACGGATTCC GCTTGGATGC AGCGAAAGAG TATTTTTCCG GTGAAAAAGA AAGAAATATT GAAGTTCTTA AGTGGTTTTC GGATTATGTA AAAAGTGTGA AAGAGGATGC CGACATTGTT GCGGAAGTAT GGGATGAAGA GGGTACTATA GCAGCTTATT ATGAAAGCGG AATTCCAAGT TTATTTAACT TCCCACTTTC CCAACACAAT GGATTAATTA CAAACACAGC CAGAAAATTG GGTACTTCTT CTGGTAAAAA CTTTGCTAAA ACTTTACTTC GTTTAGATGA GAAGTATAAG GAGGGTAATC CTAAATATAT AGATGCTCCG TTTATTAGTA ATCATGATAC CACAAGAATA TCTGCCCAAT GTGTCAATGA TGAAGATCAA ATGAAAATGT CAGCAGGTAT GTTATTGACC ATGAATGGCA GCCCATATGT CTATTATGGA GAAGAGATTG GTATGAATAG TAAGGGAACC AAGGATGAGA ATAAAAGATT GCCTATGCAG TGGTCAGCTA CAGATACTAC GGGAATTACT ACACCACCAG CTAATGCAGA TTCTGTAGAG CAGAAGTTCC CTCCTGTCGA TGAGCAAATG AAAGATCCTC TATCCCTTTA TAACTACTAT AAGAGAGCAG TTAGAATCCG TAATGAGAAC CCAGAGATTG CAAGAGGAGA TATGAGTGTA ATTGAAGAAT TATGCACAAA GGACATCAGT GCAATTAAAA AGGTATACCA AGGCAGTGAA ATTGTGATTC TTTATAATAT TAATACAGAA TCAGCCAACA TATTGTTAAA AGATGCAGGT CTTACGGAGT TAAATATCAG AGGATACTTA TCAGTGGATG GAAATGCAGT TACCATGTCA GATGGTGTTG TTTCAATGCC TAAGTATTCG ATAGTTATAT TAAAATAA
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Protein sequence | MRKKILLLSC LIIVLLAASA CKKADVNQNP SELNQDESQK EKEENDDEGT PEVSQDETKA VIPYDYVQNL NIIDDNYRNF YEIFVYSFYD SNGDGIGDIN GVISKLDYIN DGNDATDSDL GFNGIWLMPI MPSTTYHKYD VTDYYNIDPQ YGTLEDFKNL VSECHKRGIH LIIDFVFNHT SAKHPWFLEA VSYLESLKEG EEPDLEKCPY VGYYHFTKDY NGSKTYYKAG TSNWYYEGVF WDQMPDLALE NENVRKEIED IAKYWLDLGV DGFRLDAAKE YFSGEKERNI EVLKWFSDYV KSVKEDADIV AEVWDEEGTI AAYYESGIPS LFNFPLSQHN GLITNTARKL GTSSGKNFAK TLLRLDEKYK EGNPKYIDAP FISNHDTTRI SAQCVNDEDQ MKMSAGMLLT MNGSPYVYYG EEIGMNSKGT KDENKRLPMQ WSATDTTGIT TPPANADSVE QKFPPVDEQM KDPLSLYNYY KRAVRIRNEN PEIARGDMSV IEELCTKDIS AIKKVYQGSE IVILYNINTE SANILLKDAG LTELNIRGYL SVDGNAVTMS DGVVSMPKYS IVILK
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