| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2343 |
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| Symbol | |
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| ID | 5745402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2889298 |
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| End bp | 2891253 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293433 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_001559443 |
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| Protein GI | 160880475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TATATGGAAA AAATGATTGG AAGACATTAG ATAGGGGACA GGAAAACTGT
TATCTGATAA CGAATGGATT AGGTGGTTAT TCTTCCCTTA CCACAATTGG TTCTAACAGC
CGTAACGACC ATGCTCTGCT GATGGCTTGT ACTATAGCGC CTAATCATAG ATATCATTTA
ATTACACGAA TGGATGAAGT TGTTGAACTG GATAAAGAGA AGTTTAGTTT ATCTAGTCAA
GAATATGTAA ATCATGCGAA AAACCAATTA GGATTTCAAT ATTTAAATCA ATTTACATTT
GAATATTATC CTGTTTGGGT GTATCAGGTA GAGGGAATTG AGATTAAGAA AACTGTCTTA
ATGTCTTATG GGGAGAATAC AATTGGGATA CGTTATGTGA TTCATAATAA CATGGACAAA
GAAGTTAAAT TAACTATCAC TCCTCAGCTT CAATTTATTC CTAAAGGTGA TACCTTAAAT
CCGAATCAAA TATTTGAAAT TAATGATAAT GTGATAAGTA GTAATGGAAT CAGGTTAAAT
TATACGACCA ATGGAACAAT TGCCAGCTAC CCTACAGAAT ATACAAAAGA TTTATATTAT
GGTTACGATG CAAGAGATGG ACGAGAAGCA ATAGGTGTGA CAGCATCTAA TCATAATATT
TCCGTAACAG TAGCTGCTTA TGATGAATTG GTATTCGATG TAATATATAG CACAGATCCT
ATCGTTACTG CCATAGATAG TATAATAGAA AATGAAACGA AGAGACTGGA AGGTCTTGTA
ACTCAGTCTG GAATTAAAAA TGAAGTAGGA AAGCAATTAG TTAAAAGTGC GGACCAATTT
TTGGTTGACA GAGATTCCAC CAAAGGAAAA ACCCTCATGG CAGGATACCC ATTCTTTGCT
GATTGGGGAA GAGATACTAT GATATCTATG GTAGGCTGCT GCATTTCTAC AAAGCGGTAT
GAAGAAGCGA AAAGTATATT CCGTACCTTT ATGCAGTATT GTAAGAAAGG CTTAATGCCA
AATATGTTTC CAGAAGGAGG CAACGATCCT TTATATAACA CCGTAGATGC CTCCCTCCTT
TTTATCGGTG CTGTATATGA GTACTATTTA GAAAGTAATG ACATTGCCTT TGTAGAGGAG
GCATATGCCA TTATGGAAGA TATTATAAAA TGGTACAAAC AAGGCACGGA TTATCATATT
AAAATGGATA CAGACGGTTT AATTATGGCT GGTAGCGGAT TGGAACAGGT AACCTGGATG
GATGTACGGT TTGAAGATAT TTTACCAACC CCACGACATG GAAAGCCAGT TGAAATCAAT
GCCTATTGGT ACAATGACTT AAAAATCATG GGTCTGTTTG CCAGATTGTT AGGCAGAGAA
GACAATCAAT ATGAAGAGCT TGCTGACTTA GTAAGTGTCA GCTTTTCTGA AAAGTTCTGG
AATGAATCAG AGAATTGTCT AAAGGATTTA GTATCGGGTG AAGAAGCGGA CAATCAGATT
CGTTGTAACC AAATATGGGC AGTATCCCAG CCTTTTTCCT TGTTGGATAA GGATAAGGAG
AAGATGGTTG TGAGTAAAGT ATATGAAACC TTATATACTC CATATGGACT TCGAAGTTTA
AGTAAGAATG ACAAAGCTTT TAAAGCTATT TACGGGGGCT CACACTTTAA CCGTGATATG
GCTTATCATC AAGGAACTGT ATGGGCATTT CCTTTAGGTG CTTATTATTT GGCTTATCTT
AAAGTAAATG ATGAAAGTTT AGAAGCTGCA AAAAGAGTAA AAGAACAGCT GGAAGCTTTA
GAAGCATGTA TGAGAGAAGG CTGTATTGGA CAAATTGCAG AAATATATGA CGGAGAAAAT
CCTACGATCT CCCAAGGTTG CTTTGCGCAA GCCTGGAGTG TCAGTGAGTT ATTAAGAGTT
TTTGCTAAAA TTGAGAAAGT TGAAAAAAAT CTTTAA
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| Protein sequence | MKFIYGKNDW KTLDRGQENC YLITNGLGGY SSLTTIGSNS RNDHALLMAC TIAPNHRYHL
ITRMDEVVEL DKEKFSLSSQ EYVNHAKNQL GFQYLNQFTF EYYPVWVYQV EGIEIKKTVL
MSYGENTIGI RYVIHNNMDK EVKLTITPQL QFIPKGDTLN PNQIFEINDN VISSNGIRLN
YTTNGTIASY PTEYTKDLYY GYDARDGREA IGVTASNHNI SVTVAAYDEL VFDVIYSTDP
IVTAIDSIIE NETKRLEGLV TQSGIKNEVG KQLVKSADQF LVDRDSTKGK TLMAGYPFFA
DWGRDTMISM VGCCISTKRY EEAKSIFRTF MQYCKKGLMP NMFPEGGNDP LYNTVDASLL
FIGAVYEYYL ESNDIAFVEE AYAIMEDIIK WYKQGTDYHI KMDTDGLIMA GSGLEQVTWM
DVRFEDILPT PRHGKPVEIN AYWYNDLKIM GLFARLLGRE DNQYEELADL VSVSFSEKFW
NESENCLKDL VSGEEADNQI RCNQIWAVSQ PFSLLDKDKE KMVVSKVYET LYTPYGLRSL
SKNDKAFKAI YGGSHFNRDM AYHQGTVWAF PLGAYYLAYL KVNDESLEAA KRVKEQLEAL
EACMREGCIG QIAEIYDGEN PTISQGCFAQ AWSVSELLRV FAKIEKVEKN L
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