Gene Cphy_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2272 
Symbol 
ID5745331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2801915 
End bp2802787 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content39% 
IMG OID641293362 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001559372 
Protein GI160880404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTA AAAGGCGATT ATTTCGTAGG CAAAAGCAGC TAAACCGTTC CGCTGCCGGG 
AATGGGCTAT TATTCACCTT GATGTTTTTT TGCGGTATCT TTATGGCGCT TCCGCTCGTT
ATGATTGCGA ATAATGCACT AAAGCCATTG GATGAAATTT TTAAATATCC TCCGGCAATC
TTCGTAAAGA ATCCGACCTT AGAAAACTTT ACGGACCTGT TTGTATTGAT GAATGATACT
TGGGTACCAT TCTCAAGATA CATCTTTAAT ACTTTTATTA TCACAGGATT TGGAACGGTT
GGTCATGTAC TGGTCGCTTC ACTAGCAGCC TATCCATTAG CAAAACATGA CTTTCCTGGA
AAGAAAATTA TCTTCCATAT GATTGTATTA TCCATGATGT TTTCTTGGAC AGTAACACAG
ATTCCAAATT ATATGATAAT TTCATTCTTA CATATTAACA ATACGTACTT AGCATTAATA
CTTCCAGCTT GGCAGTTTGG TATGGGACTT TATCTAATGA AACAGTTTAT GGAGCAGATA
CCAACCACGC TAGTTGAATC TTCCAGACTA GATGGTGCAA GTGAATGGAA GACCTACTGG
ACCATTATTA TGCCTAACGT AAAACCGGCA TGGTTAACGC TCGCAATCTT TCAATTTCAG
CAGATGTGGG GGAATACTGG AAGCACCTTC TTACGAAGTG AAGAATTAAA ACCTTTACAA
TTTGCCTTAC AGCAGATTAC CGCAGGCGGT GCTAAAAGAG CGGGTGCTTC CGCAGCAGTT
AGTTTTATAC TGGCAGCAAT CCCGATTACC TTCTTTTTAA TCTGTCAAAG TAATATTCTT
GAAACGATGA CAACATCAGG TATGAAAGAA TAG
 
Protein sequence
MKPKRRLFRR QKQLNRSAAG NGLLFTLMFF CGIFMALPLV MIANNALKPL DEIFKYPPAI 
FVKNPTLENF TDLFVLMNDT WVPFSRYIFN TFIITGFGTV GHVLVASLAA YPLAKHDFPG
KKIIFHMIVL SMMFSWTVTQ IPNYMIISFL HINNTYLALI LPAWQFGMGL YLMKQFMEQI
PTTLVESSRL DGASEWKTYW TIIMPNVKPA WLTLAIFQFQ QMWGNTGSTF LRSEELKPLQ
FALQQITAGG AKRAGASAAV SFILAAIPIT FFLICQSNIL ETMTTSGMKE