Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2258 |
Symbol | |
ID | 5745318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2781202 |
End bp | 2783832 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641293350 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001559360 |
Protein GI | 160880392 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000147959 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA AAATCAAAAA CTATAAGAAA ATGTGCGTAT TGTTAATTGT GAGCTTATTA ATAAGTTCTG CCCCTGTGGA TCAGGCACAA GCAGCAAGCG GGCTTAAAAT CTACAATTAC ACAACAAACT CCTCTATGAC AGTAACTGAC GAGACTATCT CTTACGTATA TAACGAGAAA TCAATTCCAC TAGGGAATAA CCCTGGAATC CTATCAAGCA ATGGAGTTGC CTTAGGGCCA TATGTAAAGA TCTTCCGTGA TGCTCTAGGG ATTAAGACTC TTTATAATAA GGAGAAAAAA ACAGTTACTC TTAGAGATGA CAAGACTACT CTTGTATTAA CTTTAGGTAG TAAAACTGCA CAAGTGAATG GAAAATCTGT AACTATGAAT GCAGCACCAA TCTCCATTAA GTATTCCAAG GCAAATGAAA CAGCCATATT AGTTCCAACA AGATTTGTTG CGGAAACCTT TGGTTATTCT TATGACTGGA ATAGTACAAG TTCTACGGTT ACAATTACAA AGCCTCTAAA CTTGACCTAT GACAATCAGT TAGTTAGCTA TACTGGGATT CAAGGATCTG TGAAATTTGA TGGTAAAAAC GTAAATGTTT CCAATCTTCC TAGCATCTTA ATTGCAAACA CCGCTATGGC TCAAGCATAT AAAGTCTTTG CAAAGGGTAT GGGGGTAACT TACAAGTATT CCGAAAGCAA AGGAACTATT TCCTTTACAA AAGGTAATAT TAATTTATTA ATGGAATTAG GTAGTAAGAT CGCTTACTTA AACGACGAAG TAGTTGATTG TGGTGTAGCA CCAAAACTTG TATTTAATGA AGATAATGGC GAAGTAGCAG TATTAGTACC AGCACAGTTT GTATCAAAAG CTCTAGGTTA CGATTATAAC TGGAATTCCG CTACAAAAAC ATCTGAAATC ACAACGACGA AAAAGGTTGG TAAAGAGCCA AACATAACGA TACCTCCAGT TTCACCAAGT ACTCCAGGGG ATGGTAACTA TAGCGAGTCG GAATATTTTA ATTGGACTGC AAAAGATAGT TACAAAGATG TATTAGAAGA AGCAAAAAAT GCGATGAATT CTAAGAACTC TATTGATACA GGTAGTGTAA CTATTTCTCA ATTTTTAAAA CTTGATACGG ACCAATTAGC AAAGAATAAA GAAAATTACC AGTTTAGTTT TAATGAGACA TTTTCAAGTG TGACTGCTAT AAAAGATAAG GAAGAATTAA TTTTATCTTT TAAAAATATG GTTGCTACAG ACAGTTTATC TACCTTCGGG AATGAATTAG CGAAGGAAGC AAGAGTAATC TATGATGCAG TGAAAAACCA AACAGATGTT ATCTTCACAT TATCGGATGC TTCGATAAGT TATACTTTGA CATCAGAAAA TGATGGTAAG GGCTTATCCT TATCCCTCTA TTCAAATTAT CTAACACAAA TAAGTGCAGG TAGGGATGAT AGCGGTTCTG AGTATTTATC AATCACCGGA CTTAAAGATA TCAAACCAAT CGTTACACAA GATGAAGATA GTATCTATGT ATCCATACCG AATACGATAA ATACATTAGG TGATAATAAT TTCTCTAATA AAGAAGAAAA TTCATCTATG TTATTTGTAT CGTTAAATTC AATGTCAGCA AACAACTCGT TTCTGATTAT ACAAAAACCA TCACCAGATG TAACTTACGA ACTCAATCAA GATGGTTCTA CTTATACTTT AACCTTTGAG AAAGAAGAGG AAATCCCAGT AATCGATAAT TCATCTCTTA AGATTGCATT ACCAAGCGGT ATTCGCTTAT CGGATATTTC TTCTGAGGAT AACTATAATA AAAAGCAAAT TTCTATATTT ATAAAAGGGG ATCATCGTAC TTTCTTTGAG CAAAACCCTA TTGTAAATAC GTATGACAAT GTTTCAAACA TAAAAGTTTC TTATTCATCC AGTAAAGGTA CTGAATTACT TATTACTACA AAAGTGATAC AAGGCTTTAA ATATACTATA GTAGATGGAA AGCTACAAGT TACGATTGAT CGACCAAGCG CAATCTATGA TAAAATTATC ATTCTTGATG CAGGGCATGG CGGCAAAGAT CCAGGAGCAC TCAAAGGTAC GACACAAGAA AAAGTAATTA ACTATAAGAT ATTAAATGAG TATGCAAAAG AATATTTTAC AAACTCAGGT ATTAAGGTTT ATTACACAAG AGTTGATGAT ACCTTAATTG CACTTGATGA CCGAGCTGCA TTTGCAAAAC AGGTGGACGC AGATTTCTTT ATCAGTTTAC ACTGTAACTC AGCTACTACC TCCGCTGCTC GTGGTACCAG TGTGTATTAT AGCAGTGTAA ATAAATCGAA GACATCAAGC GGATTAACAA ATACGATCTT AGCGAATACC TTAGTTAACA ATCTATCCAA AGCATTAGGT ACTAAGAATC TTGGTATTAT TGATAAAGGC TTTGTTGTTG TTCGAGATAA CTCAGTACCT GCTGTTCTAA TTGAGTTAGC ATTTTTAACG AATCCAGATG ACTTAGCATT ATTAACGAGT TCTACCTCTC AAAAGAAAGC AGCGAAAACT ATTTATGATA CTGTAGCAAG CTTATTTGAA GCTTATCCTA CGAATAGATG A
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Protein sequence | MRKKIKNYKK MCVLLIVSLL ISSAPVDQAQ AASGLKIYNY TTNSSMTVTD ETISYVYNEK SIPLGNNPGI LSSNGVALGP YVKIFRDALG IKTLYNKEKK TVTLRDDKTT LVLTLGSKTA QVNGKSVTMN AAPISIKYSK ANETAILVPT RFVAETFGYS YDWNSTSSTV TITKPLNLTY DNQLVSYTGI QGSVKFDGKN VNVSNLPSIL IANTAMAQAY KVFAKGMGVT YKYSESKGTI SFTKGNINLL MELGSKIAYL NDEVVDCGVA PKLVFNEDNG EVAVLVPAQF VSKALGYDYN WNSATKTSEI TTTKKVGKEP NITIPPVSPS TPGDGNYSES EYFNWTAKDS YKDVLEEAKN AMNSKNSIDT GSVTISQFLK LDTDQLAKNK ENYQFSFNET FSSVTAIKDK EELILSFKNM VATDSLSTFG NELAKEARVI YDAVKNQTDV IFTLSDASIS YTLTSENDGK GLSLSLYSNY LTQISAGRDD SGSEYLSITG LKDIKPIVTQ DEDSIYVSIP NTINTLGDNN FSNKEENSSM LFVSLNSMSA NNSFLIIQKP SPDVTYELNQ DGSTYTLTFE KEEEIPVIDN SSLKIALPSG IRLSDISSED NYNKKQISIF IKGDHRTFFE QNPIVNTYDN VSNIKVSYSS SKGTELLITT KVIQGFKYTI VDGKLQVTID RPSAIYDKII ILDAGHGGKD PGALKGTTQE KVINYKILNE YAKEYFTNSG IKVYYTRVDD TLIALDDRAA FAKQVDADFF ISLHCNSATT SAARGTSVYY SSVNKSKTSS GLTNTILANT LVNNLSKALG TKNLGIIDKG FVVVRDNSVP AVLIELAFLT NPDDLALLTS STSQKKAAKT IYDTVASLFE AYPTNR
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