Gene Cphy_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2243 
Symbol 
ID5745303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2763191 
End bp2764294 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content37% 
IMG OID641293337 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001559347 
Protein GI160880379 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTGGGCACT CATGCTAGTA GCAGTTATGG TGTTTAGCCT TTCGGCTTGT 
GGAGGAAGCA AAGGCACATC AGGTAAAGGA TCTTCTTTAA ATGTAGGTGT ATTTTACTAT 
ACATATAGTG ATACCTATAT TTCAAGTGTT CGTACTGCAC TTGATAAATC ACTAACAGAT 
GCAGGTATCA AATATCAGAA TTATGATGGA AATAGCAATC AGACTACTCA GAATGAGCAG 
ATTGATACCG CAATTAGTCA GGGAACAAAT TTATTGATTG TAAATATTGT AACATCTGGT 
TCTATGGATG CATCTAATTC AATCGTAGAG AAAGCAAAGG CTGCTAAAAT TCCAGTAATT 
TTCTTTAACC GTGCAGTAGA ATCTGATGAA GATGAAGGCA AAGTGTTAGG AAGCTATGAT 
AAATGCGCAT TCGTTGGAAC AGATGCACCG GAAGCTGGAC ATATGCAAGG GCAAATGGTA 
GGCGATTATG TAGTAAAGAA CTTTGATGCT ATTGACTTAA ACGGTGATGG CAAAATCAGT 
TATGCAATGT TCATGGGTCA GTTAGGTAAC GTAGAAGCTA TCTATCGTAC TCAGTTTGGT 
GTAGAAGATG CGGATAAAGT AATCACAGCA GCTGGAAAGC CTGCATTACA ATACTTTGAT 
TCATCAAACT CTGATAAATA TCAGGTTGAC AAAGATGGTA CTTGGTCTGC ATCAGCAGCA 
AATGACTATA TGACAACAAA CCTTGCTCAG TACAGTGAAG CTACAAATAA TATGATTGAG 
TTAATTATCT GTAATAACGA TGGTATGGCA GAAGGCGTTA TCTCCGCACT CAATGACAAA 
GGATATAACT TAGGAACTGC TGATTGTAAG ACTATTCCAG TATTCGGTGT AGATGCAACA 
GATGCAGCAA AACAGTTAAT CGCAGATGGT AAGATGACTG GTACGATTAA ACAGGATGCT 
GTAGGTATGG CAGATGGAAT CGCTTATCTT GCTAAGAATA TTCAGAATGG TAAAGATTTA 
ATGGCTGATA CAAGTAACTT TAACATTTCT CCTAAAGTAA GCAACAAGAT TTACATCCCA 
TATGCTGCTT ATATCGGTGA ATAA
 
Protein sequence
MKKFWALMLV AVMVFSLSAC GGSKGTSGKG SSLNVGVFYY TYSDTYISSV RTALDKSLTD 
AGIKYQNYDG NSNQTTQNEQ IDTAISQGTN LLIVNIVTSG SMDASNSIVE KAKAAKIPVI 
FFNRAVESDE DEGKVLGSYD KCAFVGTDAP EAGHMQGQMV GDYVVKNFDA IDLNGDGKIS 
YAMFMGQLGN VEAIYRTQFG VEDADKVITA AGKPALQYFD SSNSDKYQVD KDGTWSASAA 
NDYMTTNLAQ YSEATNNMIE LIICNNDGMA EGVISALNDK GYNLGTADCK TIPVFGVDAT 
DAAKQLIADG KMTGTIKQDA VGMADGIAYL AKNIQNGKDL MADTSNFNIS PKVSNKIYIP 
YAAYIGE