Gene Cphy_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2229 
Symbol 
ID5744540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2750045 
End bp2751046 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID641293323 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001559333 
Protein GI160880365 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.176844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA ACATTGCAAT AAATGGCTTC GGCCGAATTG GAAGGCTTGC GTTCCGGCAA 
CTTTTTAATG AGGAAGGATA TAGGATTGCT GCCATCAATG ACCTTACAAG CCCCCAAATG 
CTTGCACATT TGCTAAAATA TGATACCACA CAGGGACAAT ACAACAAAGC AATTAGCTAC 
AATGAGAACA GCTTGATTGT GGACGGTGTG ACTATTCCAA TCTATGCCCA AAAAGACCCC 
AGCGAACTAC CGTGGGAAAA ATTACAAATC GATGTGGTTC TGGAGTGTAC GGGATTTTTT 
GCATCAAAAA GTGCGGCCGC CGCACATATT AATGCGGGCG CAAGAAAAGT ATTGATATCC 
ACCGCTGCGG GAAAAGATGT TCCCACTATT GTTTACGGTA TCAATGAACA CACCTTGACA 
AAAGAAGATA CCATTGTTTC AGCAGCATCT TGCACCACGA ATTGTCTTGC TCCAATGGCA 
TATTTCTTGA ACGAGCTAGC ACCTATCAAG AAAGGCTTCA TGACTACAAT TCACGCCTAT 
ACAAATGACC AGAATACCCT TGATGGCCCC CATGCCAAAG GTGACTTGCG TAGAGCACGC 
TCTGCAGCTG GAAACATCAT TCCTACGACT ACCGGAGCGG CTAAGGCTAT TGGACAGGTG 
ATTCCAGCCT TAAACGGAAA ATTGGATGGA ACATCTCAAA GGGTGCCGAT TATGGCAGGC 
TCACTCACAG AATTGTCTGC GGTAGTGGAA GGCTCCGTTA CAGTGGAACA GGTGAATCAG 
AAGATGAAGC AATCCCAATC AGAGCAATAC GGATATACAG AGGAACAGAT TGTATCGTCG 
GATATAATTG GCATGAACTA TGGTGGATTG TTTGATGCAA CACAAACAAA AGTAGCAGAA 
TTAGGAGCAG ATACGCTGGT GAAAATAGCC GCATGGTATG ATAACGAAAA CTCTTTTACT 
AGCCAAATGA TTCGTACTGT AAAATACCTT GCAGAATTAT AA
 
Protein sequence
MDINIAINGF GRIGRLAFRQ LFNEEGYRIA AINDLTSPQM LAHLLKYDTT QGQYNKAISY 
NENSLIVDGV TIPIYAQKDP SELPWEKLQI DVVLECTGFF ASKSAAAAHI NAGARKVLIS 
TAAGKDVPTI VYGINEHTLT KEDTIVSAAS CTTNCLAPMA YFLNELAPIK KGFMTTIHAY 
TNDQNTLDGP HAKGDLRRAR SAAGNIIPTT TGAAKAIGQV IPALNGKLDG TSQRVPIMAG 
SLTELSAVVE GSVTVEQVNQ KMKQSQSEQY GYTEEQIVSS DIIGMNYGGL FDATQTKVAE 
LGADTLVKIA AWYDNENSFT SQMIRTVKYL AEL