Gene Cphy_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2190 
Symbol 
ID5744501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2704764 
End bp2706071 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content38% 
IMG OID641293285 
ProductAlpha-L-fucosidase 
Protein accessionYP_001559295 
Protein GI160880327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3669] Alpha-L-fucosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAGT TTAATAGAGA TGATTATAAC AAGAGAATGG AATGGTACCA GGACGCTAGA 
TTTGGAATGT TTATTCATTG GGGCTTATAT TCAATTCCAG CCCGTGGAGA GTGGCTTCGA
AGTACGGAAG AGATGTCAAT TGAGGATTAT CAGAAGTATT TTGATGAATT TGATGCTAGA
GATTATGATC CTAAAAAATG GGCAAAGCTC GCGAAAGAAG CAGGAATGAA ATATGTTGTT
CTTACGGCAA AACATCATGA TGGATTTTGT TTGTTTGACA GCAAATATAC AGAATATAAA
GCAACAAATA CAAAAGCAGG AAGAGATCTT GTTAAGGAAT ATGTGGATGC GGTGCGTGCA
GAAGGTTTAA AGGTGGGGCT CTATTTTACT TTACTTGATT GGTACCATGA AGACTATCCG
CATTACGGCG ATCGAATTCA TCCAATGAGA AATAATAAGA ATTGTGGAAA TGAGAATCGT
GATTTTAGCC GTTACGTTGA GTATTTTCAT AAACAAGTAG AAGAGATTTG CACGAATTAT
GGACAATTGG ATGTCTTGTG GTTTGATTTT TCCTATGATG ATATGCGAGG AGAAAAATGG
GGTGCTACAA AGCTCATGAA TATGGTTAGA ACTCTTCAGC CACAAGTAAT TATTGATAAT
CGACTTGAAG CAAGTGGGGA AGGTAAAGGT TCCTTAGCGG AAGGTAACCC AACCCCATAT
CACGGTGACT TTGTAAGTCC AGAGCAAATC ATTCCGCCAG AAGGAGTAAA AGATGTGAAC
GGTGATCCAC TGGTATGGGA AGCATGTATT ACCATGAACA ACAACTGGGG ATACCACGGA
ACAGATAAGT TCTTTAAACC AGCACCTATG TTGATTAAGA AGCTTGTAGA GTGTGTATCA
AAGGGTGGCA ACATGCTACT TAATGTTGGG CCTGATGCCT ATGGTAATAT CCCAGAAGAA
TCCGTAGAGA TCCTATCTCA GATTGGGAAA TGGATGAAAC GTAACCATGA TAGTATCTAC
GGATGTGGTA TTGCAAATGT ACCAAAACCA GACTATGGAC GTGTTACGAG AAAGGGAAAC
AAATATTATT TTCATATGTT TGAGAATACT ATTGGACCGG TACCTTTGTT AGGATTAGAG
AAAAATAAAG TGAAAAAAAT CAGAGCATTA GCTACAGGAT ATGAGATTCC GATCTCTACT
AGCTGGGTAC ATAGTGATTA TCCAGACATC GTATTTGCCA ATTTGGGACC AAATCCTGTT
TTACCAGACA ATATCGATTA TGTTTTAGAA GTAGAAATGG ATGACTAG
 
Protein sequence
MYQFNRDDYN KRMEWYQDAR FGMFIHWGLY SIPARGEWLR STEEMSIEDY QKYFDEFDAR 
DYDPKKWAKL AKEAGMKYVV LTAKHHDGFC LFDSKYTEYK ATNTKAGRDL VKEYVDAVRA
EGLKVGLYFT LLDWYHEDYP HYGDRIHPMR NNKNCGNENR DFSRYVEYFH KQVEEICTNY
GQLDVLWFDF SYDDMRGEKW GATKLMNMVR TLQPQVIIDN RLEASGEGKG SLAEGNPTPY
HGDFVSPEQI IPPEGVKDVN GDPLVWEACI TMNNNWGYHG TDKFFKPAPM LIKKLVECVS
KGGNMLLNVG PDAYGNIPEE SVEILSQIGK WMKRNHDSIY GCGIANVPKP DYGRVTRKGN
KYYFHMFENT IGPVPLLGLE KNKVKKIRAL ATGYEIPIST SWVHSDYPDI VFANLGPNPV
LPDNIDYVLE VEMDD