Gene Cphy_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2157 
Symbol 
ID5744163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2666709 
End bp2668148 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content38% 
IMG OID641293252 
Productpyridoxal-dependent decarboxylase 
Protein accessionYP_001559262 
Protein GI160880294 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGC ATGAAATAGT ACTTAATACG CAATCTGAGC GTGTAGCAGT TGAATTTATC 
AAAAAGTTTT GTTCAGAGAA ACAGGAATTA TATGATCAAA AAATACTTAA TGATGCCGAT
AAAAATCAAA TTGCTAAATT AAAACATATG AATATCCCAG AAGAAGGACG TTCCATAGAT
ACCGTTGTTA ATGAAATGAT GGAGGATATC TACCAATACG GATGCCATAC AAATCACACT
AGATTTTTAG GCTTTATTCC TGGACCAGCT TCCGAAGTTT CTTGGTTAGG TGATATTATG
ACTTCTGCCT ATAATCTGCA TGCTGGAAGC TTTATGAACT GTCCTGCTGC AAGTTGCATT
GAACAGGAGT TAATTCAGTG GCTTTGCGAG CAAGCTGGTT ATACTAACGA AGCTGGTGGC
TTATTTGTGT CCGGTGGTTC AATGGCTAAT ATGACTGCAT TATGTGCTGC TCGAGACAAA
ATGTTAACAG AGGAGCGTCA GCATCTAGGC GTTGCCTATG TTTCTGATCA AACCCATAGT
TCTGTAGCAA AAGGTCTTCG TATCATCGGT ATTCCTAACA CAAGACTTAG AAAAATACCA
ACAGATATGA ATTTCCGAAT GGATATGAAG CAACTAGAGT GCGCTATTCA AGCAGATATT
GCTGCAGGCT TGGTTCCTTT TACTGTGATT GCAAGCGTTG GATCTACCAA TACTGGAAGC
ATTGATCCAC TGGAGGAAAT TGCGCTTTTG TGTAATCAAT ACAATCTATG GATGCACGTA
GATGGAGCAT TTGGAGCTTC CGTCTTATTA ACAAAGAAAT ATAAACACCT TCTAAAAGGA
ATAGAGCTAT CCGACAGTAT CAGTTGGGAT GCTCATAAAT GGTTATTTCA AACTTATGGG
TGCGGAATGG TATTGGTAAA AGACAAGGCT AATCTTGTGA ATAGTTATCA CACAAATCCT
GAATACCTAA AGGACCTTGA GACAGATGGC GACTGCATTA ATCCCTATGA TATAGGTATG
GAATTGACAA GACCAGCTCG CGGATTAAAG TTATGGCTTA CCTTGCAGGT ACTTGGAAGT
GATAGGATGG GGGCTGCTAT TGAGCATGGA TTCCAACTCG TAGAGTGGGC AGAAGATGAA
TTAAAGAAAA ATAGTGAAAT AGAGATTATA TCACCTGCAC AACTTGCTAT TATAAACTTC
CGATATGCCC CTCAGACATT TACAGAAGAT CAAAAAGACG AACTGAATTT AAAGATATCA
AAGAAGATGA TTGACGATGG TTATGCTGGT GTCTTCACCA CAGTATTAAA CGGTAAAAAA
GTTTTACGTA TTTGCGCGAT TCATCCAGAA GCAACGGAAT ACGACATGCG TAGCACTGTA
CAACGCTTGA ATCAATATTT TAATGAAATT TATCCAGTAA TGAAAGCAGA ATTAGTATAG
 
Protein sequence
MEMHEIVLNT QSERVAVEFI KKFCSEKQEL YDQKILNDAD KNQIAKLKHM NIPEEGRSID 
TVVNEMMEDI YQYGCHTNHT RFLGFIPGPA SEVSWLGDIM TSAYNLHAGS FMNCPAASCI
EQELIQWLCE QAGYTNEAGG LFVSGGSMAN MTALCAARDK MLTEERQHLG VAYVSDQTHS
SVAKGLRIIG IPNTRLRKIP TDMNFRMDMK QLECAIQADI AAGLVPFTVI ASVGSTNTGS
IDPLEEIALL CNQYNLWMHV DGAFGASVLL TKKYKHLLKG IELSDSISWD AHKWLFQTYG
CGMVLVKDKA NLVNSYHTNP EYLKDLETDG DCINPYDIGM ELTRPARGLK LWLTLQVLGS
DRMGAAIEHG FQLVEWAEDE LKKNSEIEII SPAQLAIINF RYAPQTFTED QKDELNLKIS
KKMIDDGYAG VFTTVLNGKK VLRICAIHPE ATEYDMRSTV QRLNQYFNEI YPVMKAELV