Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2157 |
Symbol | |
ID | 5744163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2666709 |
End bp | 2668148 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641293252 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001559262 |
Protein GI | 160880294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGC ATGAAATAGT ACTTAATACG CAATCTGAGC GTGTAGCAGT TGAATTTATC AAAAAGTTTT GTTCAGAGAA ACAGGAATTA TATGATCAAA AAATACTTAA TGATGCCGAT AAAAATCAAA TTGCTAAATT AAAACATATG AATATCCCAG AAGAAGGACG TTCCATAGAT ACCGTTGTTA ATGAAATGAT GGAGGATATC TACCAATACG GATGCCATAC AAATCACACT AGATTTTTAG GCTTTATTCC TGGACCAGCT TCCGAAGTTT CTTGGTTAGG TGATATTATG ACTTCTGCCT ATAATCTGCA TGCTGGAAGC TTTATGAACT GTCCTGCTGC AAGTTGCATT GAACAGGAGT TAATTCAGTG GCTTTGCGAG CAAGCTGGTT ATACTAACGA AGCTGGTGGC TTATTTGTGT CCGGTGGTTC AATGGCTAAT ATGACTGCAT TATGTGCTGC TCGAGACAAA ATGTTAACAG AGGAGCGTCA GCATCTAGGC GTTGCCTATG TTTCTGATCA AACCCATAGT TCTGTAGCAA AAGGTCTTCG TATCATCGGT ATTCCTAACA CAAGACTTAG AAAAATACCA ACAGATATGA ATTTCCGAAT GGATATGAAG CAACTAGAGT GCGCTATTCA AGCAGATATT GCTGCAGGCT TGGTTCCTTT TACTGTGATT GCAAGCGTTG GATCTACCAA TACTGGAAGC ATTGATCCAC TGGAGGAAAT TGCGCTTTTG TGTAATCAAT ACAATCTATG GATGCACGTA GATGGAGCAT TTGGAGCTTC CGTCTTATTA ACAAAGAAAT ATAAACACCT TCTAAAAGGA ATAGAGCTAT CCGACAGTAT CAGTTGGGAT GCTCATAAAT GGTTATTTCA AACTTATGGG TGCGGAATGG TATTGGTAAA AGACAAGGCT AATCTTGTGA ATAGTTATCA CACAAATCCT GAATACCTAA AGGACCTTGA GACAGATGGC GACTGCATTA ATCCCTATGA TATAGGTATG GAATTGACAA GACCAGCTCG CGGATTAAAG TTATGGCTTA CCTTGCAGGT ACTTGGAAGT GATAGGATGG GGGCTGCTAT TGAGCATGGA TTCCAACTCG TAGAGTGGGC AGAAGATGAA TTAAAGAAAA ATAGTGAAAT AGAGATTATA TCACCTGCAC AACTTGCTAT TATAAACTTC CGATATGCCC CTCAGACATT TACAGAAGAT CAAAAAGACG AACTGAATTT AAAGATATCA AAGAAGATGA TTGACGATGG TTATGCTGGT GTCTTCACCA CAGTATTAAA CGGTAAAAAA GTTTTACGTA TTTGCGCGAT TCATCCAGAA GCAACGGAAT ACGACATGCG TAGCACTGTA CAACGCTTGA ATCAATATTT TAATGAAATT TATCCAGTAA TGAAAGCAGA ATTAGTATAG
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Protein sequence | MEMHEIVLNT QSERVAVEFI KKFCSEKQEL YDQKILNDAD KNQIAKLKHM NIPEEGRSID TVVNEMMEDI YQYGCHTNHT RFLGFIPGPA SEVSWLGDIM TSAYNLHAGS FMNCPAASCI EQELIQWLCE QAGYTNEAGG LFVSGGSMAN MTALCAARDK MLTEERQHLG VAYVSDQTHS SVAKGLRIIG IPNTRLRKIP TDMNFRMDMK QLECAIQADI AAGLVPFTVI ASVGSTNTGS IDPLEEIALL CNQYNLWMHV DGAFGASVLL TKKYKHLLKG IELSDSISWD AHKWLFQTYG CGMVLVKDKA NLVNSYHTNP EYLKDLETDG DCINPYDIGM ELTRPARGLK LWLTLQVLGS DRMGAAIEHG FQLVEWAEDE LKKNSEIEII SPAQLAIINF RYAPQTFTED QKDELNLKIS KKMIDDGYAG VFTTVLNGKK VLRICAIHPE ATEYDMRSTV QRLNQYFNEI YPVMKAELV
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