Gene Cphy_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2127 
Symbol 
ID5744133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2629709 
End bp2631667 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content33% 
IMG OID641293222 
Producthypothetical protein 
Protein accessionYP_001559232 
Protein GI160880264 
COG category[R] General function prediction only 
COG ID[COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAT TAAAACGTAA TAGAAAAACC AAAATAATAT CCATATGTTT AATTTTTATC 
ATTGCATTGA TAGCAGCAAA ATGTGGTGTT TACGGATATC TAGCCAATTC CTTTCAGAAA
GTTAAAGTAT ATAGTAGGGA TGAACTTATA GCAAAAATCG CATATAAGGA TGTAATGGAA
ACAAGCGCAA AAACGAATGA AAAAATTGCG CAAGTCGGTA CATATAAGGA GCTTCTTTCC
ATTCTTTATT CCATGAATAT GTTATCGTTA AATAATAATT CATGGGGAAT TTTTAAAGGA
GCAAAAATTT TGACAGAAAG TAGCGTCAGC GACATACCTG TTAATAATAC TGGATATTCC
CAAACAAATA TTCAAGTATC CGGTGTTGAT GAATCTGATA TTATAAAAAA TGATGGACAT
TACATCTATT ACCTAAACGA AGGTGTACTT AGTATATTTG ATACATCCAA AGAATTACCT
GATTTAATAA GTAAAACAAA GATCGACGAT AATACCAAGA CATTATATGA TATGTATATT
TCAGGTGATA TTCTAGTTCT CTGCGGAGGG AAATATGAAG TTTTTAATAA TAGATCGGAT
TCTTCTAATT CCTATGCGGA TTATAATGAA ATGACAGAAG CAAATACTTC ACAATCCTAT
GATATATTCA CAGTGTTTGC GGTGTATGAT ATAAGTGATA GAAAATTTCC TTCCTTAAAA
CGTACCATAG AAATCGATGG AAATGACGTT TCGACGAGAC TGATTGGGAA TAATCTGTAT
TTTGTGACCA ATAAGAACTT ATCTTATATT AGAGGTAATA AAGTAAATGA TTATGAAATA
CTTCCAATGT ACAGAGATAC TGCCGATTCA ACGGAATTAA AAGTAATTCA ACCTGCTGAT
ATTTCCTATT TTCCTGATAG TAAAGTGGCA CAATATTTGT TAGTCGGAAC ATTCGATATC
ACAAAAGATG ATGCTGTTGT TCCACAAGCA TATCTTGGTT CAGGTAAAGA AGTGTATATG
AATACAAATT CCATATATAT CAGCAGGGAA ATAGATAGGC CCCGTGTATA TGAAGAATCT
TTATCCACTG AGGCTATCGC CTTTTCTTTA ACCACTGAGA TTTACAGGTT CGCGATTAGT
GGTATGGATA TTAAATTTAT TGCTAGTACT GAAATATCCG GAAAACTGAT AAATCAATAT
TCGATGGATG AATACAATGG GATCTTAAGG GTCGCATTCG ACAGGTATAT GGACGGAAAC
GGAAATGGTA TCACTATGAT AGATATCAAT ACTATGAAGC CGATTGCTTC CATAACAGGA
CTTGCCATTA ATGATAGGAT TACTTCGGTC CGCTTTATGA AGGATGTAGC ATATATGGTA
ACATCCCGTA ATGAGAATCC ACTTTTTGTA TTTAACCTTT CAAATCCTAT AAAACCATTA
AAGACAGGAG AATTAAATGT ACCGGGATTC AGTCAATATT TACACCCTGT TGGGGATCAG
TATTTACTAG GATTTGGCAG AAACATGGAA GAAAAGTTTT ATTTAGATGA GAAGAAAAAA
AAAGTCTATA CCGGGGAAAT GTTGGATGTA GGGTTTCAAT TGAGTTTGTT TGATGTGCGT
GATTTATTTA ACCCGCAGGA ATTGTCTGCA ATAGCTTACA ATGAAACTTC CAACAGTCCA
GCTAGTTATA ACCCGCATTG CATTATGGCT GATGCAGAAA ATAATATTAT TGCATTTCCA
ATATTTTTTA GAGACAGATG GCTTGGAGAA TTAGGTACCG TTGTAAAGAT AGATCCTTCT
TCTGGGCTAA CAACAGTTGC AGAAATTGAA ATGCTTACAG ATAATATACA TGACACTCGT
TTTTGCTATA CGAACGATAA ATTATATTTA TTAACAGAGA GTAATATATC AGTATATAGC
TATCCTGAGT GTGAATTTAT TAATCAAGTT TTCTATTAA
 
Protein sequence
MTKLKRNRKT KIISICLIFI IALIAAKCGV YGYLANSFQK VKVYSRDELI AKIAYKDVME 
TSAKTNEKIA QVGTYKELLS ILYSMNMLSL NNNSWGIFKG AKILTESSVS DIPVNNTGYS
QTNIQVSGVD ESDIIKNDGH YIYYLNEGVL SIFDTSKELP DLISKTKIDD NTKTLYDMYI
SGDILVLCGG KYEVFNNRSD SSNSYADYNE MTEANTSQSY DIFTVFAVYD ISDRKFPSLK
RTIEIDGNDV STRLIGNNLY FVTNKNLSYI RGNKVNDYEI LPMYRDTADS TELKVIQPAD
ISYFPDSKVA QYLLVGTFDI TKDDAVVPQA YLGSGKEVYM NTNSIYISRE IDRPRVYEES
LSTEAIAFSL TTEIYRFAIS GMDIKFIAST EISGKLINQY SMDEYNGILR VAFDRYMDGN
GNGITMIDIN TMKPIASITG LAINDRITSV RFMKDVAYMV TSRNENPLFV FNLSNPIKPL
KTGELNVPGF SQYLHPVGDQ YLLGFGRNME EKFYLDEKKK KVYTGEMLDV GFQLSLFDVR
DLFNPQELSA IAYNETSNSP ASYNPHCIMA DAENNIIAFP IFFRDRWLGE LGTVVKIDPS
SGLTTVAEIE MLTDNIHDTR FCYTNDKLYL LTESNISVYS YPECEFINQV FY