Gene Cphy_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2122 
Symbol 
ID5744128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2622861 
End bp2624255 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content33% 
IMG OID641293217 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001559227 
Protein GI160880259 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA AGAGTCTAAA GACGCAACTT TCACTGGCCA TTGCTTTAGT TGTTTTAATA 
ACAGTAGCTC TAATAAGCGT ATTATCCAAT ATATTTATAA ATAAAAAATT TAAAGACTAT
ATAGCACAGC AGCAAAAACA GCAAACAGAA GATCTAGTAT CAAGTCTTAG TCAACAATAC
AATAAGTGGA CTAGGACTTG GAATACAGAC TTTATTCATA CGATAGGAAT GTATGCCTTA
TACGATGGTT TTATCATCAA GGTTTATGAA AACGATGGTG CTTCTGTATG GGATGCTGAA
CTGCACGATA TGTCCTTGTG TACACAGGTT ATGGCAGATA TATCAAAACG AATGCAAAAA
AAATATCCAA GAATGAATGG CGAATTTACT ACAAAAGAAT ATAAGTTAAA GCAGGGAAAG
GATGAGGTCG GAATGGTATC TATCAGTTAC TATGGACCTT ATTTTCTTAG TGAAAATGAC
TTCAAGTTTT TAAGCGCTTT AAATACTATT CTTGTAAGCA TTGGTTCAGT TTCTTTATTA
TTTGCTGTTT ACATTGGATG GATGTTGGCA AGAAAAATTA GTGGGCCTAT TACCAAAACG
GTGAAAATGA CTACAGAAAT TGCTGAAGGT AATTATGAGA TACGTTTTTC AGAACATACA
GGCACAAAAG AGCTGGATGC ATTAGTTTCC TCAATCAATA ATTTAGCCAG TTCCTTAGAA
AAACAAGAAG GTATAAGAAA ACAGTTAACT TCTGATGTTT CTCATGAACT TCGTACACCA
TTGACTACAA TTGGAACACA TATAGAGGCC ATGATAGAAG GTGTATGGGA ACCAACAACG
GAGCGATTAA AAAGTTGCTA TGAAGAAATC AATCGTATAA CAAATCTGGT GAAAGATTTG
GAGCAACTTG CAAAAGTAGA AAATGATAAT TTGAAGCTAA ACATTACTTC CGTTAATATA
TTAGAGGTTA TTGATACAAT AAAAGATAAC TTTGAAACAG AGATCTATAA TAAGAGTTTG
GATGTGTCAG TAATCGGGAC TGCTAGTACT ATACTAGTAG ATAAAGAACG AATAAGTCAG
GTAATTATAA ATCTGTTATC AAATGCTATT AAATATACTC CGGACTTTGG TAAAATAGTA
ATCTCTTTAG AAGACTATGA AACAAATCTC GTTATCCAGA TGAAGGATAA TGGAATTGGA
ATACCAGAAG AAGAGTTACC ATTTATTTTT GAACGTTTTT ATAGAGCAGA TAAATCAAGA
AATAGAAGAA CCGGGGGAGC AGGAATAGGT TTAGCCATAG TAAAATCTGT TGTTCACTCT
CATGGTGGAA AGGTAGAAGT ATCAAGTAAG TTAGAGACAG GAACTGTTTT CCGAGTTATA
TTGCCAAGAA AGTAG
 
Protein sequence
MKKKSLKTQL SLAIALVVLI TVALISVLSN IFINKKFKDY IAQQQKQQTE DLVSSLSQQY 
NKWTRTWNTD FIHTIGMYAL YDGFIIKVYE NDGASVWDAE LHDMSLCTQV MADISKRMQK
KYPRMNGEFT TKEYKLKQGK DEVGMVSISY YGPYFLSEND FKFLSALNTI LVSIGSVSLL
FAVYIGWMLA RKISGPITKT VKMTTEIAEG NYEIRFSEHT GTKELDALVS SINNLASSLE
KQEGIRKQLT SDVSHELRTP LTTIGTHIEA MIEGVWEPTT ERLKSCYEEI NRITNLVKDL
EQLAKVENDN LKLNITSVNI LEVIDTIKDN FETEIYNKSL DVSVIGTAST ILVDKERISQ
VIINLLSNAI KYTPDFGKIV ISLEDYETNL VIQMKDNGIG IPEEELPFIF ERFYRADKSR
NRRTGGAGIG LAIVKSVVHS HGGKVEVSSK LETGTVFRVI LPRK