| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2122 |
|---|
| Symbol | |
|---|
| ID | 5744128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2622861 |
|---|
| End bp | 2624255 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641293217 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001559227 |
|---|
| Protein GI | 160880259 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA AGAGTCTAAA GACGCAACTT TCACTGGCCA TTGCTTTAGT TGTTTTAATA
ACAGTAGCTC TAATAAGCGT ATTATCCAAT ATATTTATAA ATAAAAAATT TAAAGACTAT
ATAGCACAGC AGCAAAAACA GCAAACAGAA GATCTAGTAT CAAGTCTTAG TCAACAATAC
AATAAGTGGA CTAGGACTTG GAATACAGAC TTTATTCATA CGATAGGAAT GTATGCCTTA
TACGATGGTT TTATCATCAA GGTTTATGAA AACGATGGTG CTTCTGTATG GGATGCTGAA
CTGCACGATA TGTCCTTGTG TACACAGGTT ATGGCAGATA TATCAAAACG AATGCAAAAA
AAATATCCAA GAATGAATGG CGAATTTACT ACAAAAGAAT ATAAGTTAAA GCAGGGAAAG
GATGAGGTCG GAATGGTATC TATCAGTTAC TATGGACCTT ATTTTCTTAG TGAAAATGAC
TTCAAGTTTT TAAGCGCTTT AAATACTATT CTTGTAAGCA TTGGTTCAGT TTCTTTATTA
TTTGCTGTTT ACATTGGATG GATGTTGGCA AGAAAAATTA GTGGGCCTAT TACCAAAACG
GTGAAAATGA CTACAGAAAT TGCTGAAGGT AATTATGAGA TACGTTTTTC AGAACATACA
GGCACAAAAG AGCTGGATGC ATTAGTTTCC TCAATCAATA ATTTAGCCAG TTCCTTAGAA
AAACAAGAAG GTATAAGAAA ACAGTTAACT TCTGATGTTT CTCATGAACT TCGTACACCA
TTGACTACAA TTGGAACACA TATAGAGGCC ATGATAGAAG GTGTATGGGA ACCAACAACG
GAGCGATTAA AAAGTTGCTA TGAAGAAATC AATCGTATAA CAAATCTGGT GAAAGATTTG
GAGCAACTTG CAAAAGTAGA AAATGATAAT TTGAAGCTAA ACATTACTTC CGTTAATATA
TTAGAGGTTA TTGATACAAT AAAAGATAAC TTTGAAACAG AGATCTATAA TAAGAGTTTG
GATGTGTCAG TAATCGGGAC TGCTAGTACT ATACTAGTAG ATAAAGAACG AATAAGTCAG
GTAATTATAA ATCTGTTATC AAATGCTATT AAATATACTC CGGACTTTGG TAAAATAGTA
ATCTCTTTAG AAGACTATGA AACAAATCTC GTTATCCAGA TGAAGGATAA TGGAATTGGA
ATACCAGAAG AAGAGTTACC ATTTATTTTT GAACGTTTTT ATAGAGCAGA TAAATCAAGA
AATAGAAGAA CCGGGGGAGC AGGAATAGGT TTAGCCATAG TAAAATCTGT TGTTCACTCT
CATGGTGGAA AGGTAGAAGT ATCAAGTAAG TTAGAGACAG GAACTGTTTT CCGAGTTATA
TTGCCAAGAA AGTAG
|
|---|
| Protein sequence | MKKKSLKTQL SLAIALVVLI TVALISVLSN IFINKKFKDY IAQQQKQQTE DLVSSLSQQY
NKWTRTWNTD FIHTIGMYAL YDGFIIKVYE NDGASVWDAE LHDMSLCTQV MADISKRMQK
KYPRMNGEFT TKEYKLKQGK DEVGMVSISY YGPYFLSEND FKFLSALNTI LVSIGSVSLL
FAVYIGWMLA RKISGPITKT VKMTTEIAEG NYEIRFSEHT GTKELDALVS SINNLASSLE
KQEGIRKQLT SDVSHELRTP LTTIGTHIEA MIEGVWEPTT ERLKSCYEEI NRITNLVKDL
EQLAKVENDN LKLNITSVNI LEVIDTIKDN FETEIYNKSL DVSVIGTAST ILVDKERISQ
VIINLLSNAI KYTPDFGKIV ISLEDYETNL VIQMKDNGIG IPEEELPFIF ERFYRADKSR
NRRTGGAGIG LAIVKSVVHS HGGKVEVSSK LETGTVFRVI LPRK
|
|---|
| |