Gene Cphy_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2115 
Symbol 
ID5744121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2614505 
End bp2615665 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content38% 
IMG OID641293210 
Productmajor facilitator transporter 
Protein accessionYP_001559220 
Protein GI160880252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAA TTTTATTAGT TGTCATTTAC GTTGCCTTTA TTAGTTTGGG ATTGCCAGAT 
TCTATCTTAG GTTCAGCATG GCCATCGATG TATCAAGATT TACATGTATC ATTTTCTAGT
GCAGGTATGA TTAGTATGAT CATAGCGGGT GGAACTATTG TATCAAGCCT AGTTAGTGAT
AGGATGTTAC GGAAATTTAG TACTGGTATT ATAACAACAG TAAGCGTAGC AATAACAGCA
GTAGCATTAC TTGGTTTTTC CTTCTCCAAT TCGTTCTGGC AATTATGCTT ATGGAGTATC
CCTTATGGCC TTGGTGCTGG TAGTGTTGAT GCAGCTCTCA ATAATTTTGT TGCGCTTCAT
TATAAATCAC GCCATATGAG CTGGCTTCAT TGTTTTTGGG GAGTGGGAGC AACTTTAGGC
CCTTACATAA TGGGACTTTG TTTGACCAAT GGGCTAAAAT GGAATTCCGG ATACCAAACC
ATTGGTGTAA TTCAAATAAT CCTTGTTATC TTTCTTTTTA TTTCCCTTCC TTTATGGAAA
GTGAAGCACA TTGATAAGGA AAATGAAGTA GTCGAAGCAA AAGGTCTCAA TTTTAGAGAA
ACGGTAAAAC TTCCAGGTGC CAAGCCTATT TTAATCGCAT TTTTCTCTTA TTCAGCATTA
GAAGCTACAG CAGGGCTTTG GGCAAGCAGT TTTATGGTTC TCTATAAAGG AATCGATGCA
GTAACCGCTG CAAAATGGGC AGCACTATTT TACCTAGGAA TCACAGTAGG TAGGTTTCTA
GCTGGTTTTG TAACTGGAAA GTTAGGGAAT AAAAAGATGA TACGTCTTGG ACAAGCCATT
GCATTTCTCG GAACAATCAT GATGTTACTG CCACTTGGAA ACCTAGGTGC TTTGTTTGGA
CTAATCTTAA TCGGACTTGG TTGTGCACCT ATTTACCCAA GCCTACTTCA CGAAACACCA
GATAATTTTG GAGCTGACAA ATCCCAATCG ATCATGGGAA TGCAAATGGC ATGTGCTTAT
ATTGGTACCA CAATTATGGC ACCCTTATTT GGTGTTATAG CAGAAAAAAT CAGTATAAGT
GTCTACCCAT TTTATTTAAT GATATTTACT GTGTTAATGT TTGTAATGGT AGAACGTGTG
AATAAGCTTC ACGGGAGATA A
 
Protein sequence
MISILLVVIY VAFISLGLPD SILGSAWPSM YQDLHVSFSS AGMISMIIAG GTIVSSLVSD 
RMLRKFSTGI ITTVSVAITA VALLGFSFSN SFWQLCLWSI PYGLGAGSVD AALNNFVALH
YKSRHMSWLH CFWGVGATLG PYIMGLCLTN GLKWNSGYQT IGVIQIILVI FLFISLPLWK
VKHIDKENEV VEAKGLNFRE TVKLPGAKPI LIAFFSYSAL EATAGLWASS FMVLYKGIDA
VTAAKWAALF YLGITVGRFL AGFVTGKLGN KKMIRLGQAI AFLGTIMMLL PLGNLGALFG
LILIGLGCAP IYPSLLHETP DNFGADKSQS IMGMQMACAY IGTTIMAPLF GVIAEKISIS
VYPFYLMIFT VLMFVMVERV NKLHGR