| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2104 |
|---|
| Symbol | |
|---|
| ID | 5744110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2599983 |
|---|
| End bp | 2601350 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641293199 |
|---|
| Product | gluconate transporter |
|---|
| Protein accession | YP_001559209 |
|---|
| Protein GI | 160880241 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA TACCATTAAT TATTGCTTTT GTCATTGCAA TTATTATTAT GATTGTTGCA
ATCTCGAAGC TAAAGATTCA CCCATTTATC TCGATTATGA CCATATCTCT ATTGTTTGGA
ATTGTTGCAG GAATTCCGCT TACCGACATT CCGGGTGTCA TTGGTACGGG ATTTAGCAAT
ACTTTCAAGA GTATTGGTAT CGTAATCATT TTAGGTGCAT TAATTGGTAC ATTGCTTGAA
AAGACAGGTG CAGCACTTAA GATGGCTGAC TGCGTTGTTC GTCTAGTTGG TAAGAAAAAT
CCTGAATTGG CAATGCTTAT TATGGGATGG ATTGTTTCAA TTCCGGTTTT CTGCGATAGT
GGTTTTGTAA TTTTAAATCC TATTCGCAAG GCACTTGTAA AACGTACAAT GAAGTCTTCT
GTTGCTTGTA CAGTAGCTCT TTCCATGGGA CTTTATATTT CACATTGCTT TATTCCACCT
ACACCAGGTC CTATTGCTGC TGCAAATACA CTTTATGAAG GCCTTGGACA AGATACAAAT
CTATTATTAG TAATGTTTTT TGGTGCTATT TGTTCTATCT TACCTTTAAT TGTAAGTTAC
TTCTTTGCAA AGTATATTGG AAAGAAAGTA AAAGCGATGG ATGAAGCAGA TAATGATGGC
GGTGAAATCG TTCAAACATA TGAAGAATTA GTAGCTAGCT ATGGAAAACT ACCGAGCGGA
TTCTTATCTT TTGCTCCAAT TATTCTTCCT ATTGTACTTA TGGGCCTCTC CTCTGCTCTT
GCAATGGCTG GAAAATCTGT AGCAGTTATC ACTTTCCTTG GTACTCCTAT TATTGCTATC
GCAGTAGGTG TTATATTTGG CTTAATCCTC CTGGTTAGTC AGAAGAAATC AAAAGAATTT
AATGAAATCA CTAATGATAC TTTAAAAGTA ACTGGACCAA TTTTATTCAT TACTGCAGCT
GGTGGTGTTT TAGGTAATGT AATCGCTTCT ACTTCAATGG TAGATTTTAT TAAATCAAAT
TCGAATGCGT TAGCTACTTT GGGATTATTG TTCCCATTCT TATTAGCTGC AATATTAAAA
ACAGCTCAAG GCTCATCTAC AGTTGCTTTA ACAACTACAG CAGGTATTAT TGCACCAATG
TTATCAACAA TTGGCCTTGC TACTTCTCCA CTTGCAGCTT TAACAGTAAT AGCAATTGGC
GCAGGTGCGA TGACAGTTTC ACATGCAAAT GATAGTTATT TCTGGGTAGT TACTAACTTT
GGTGAGATGA AAGTTGAAGA TGGATATAAG ACTCAGACAT TGGGAACTCT TATCATGGGT
ATTGCCGCAA TCATCAACGT TTATATTGTT TATCTATTCA TTCGTTAA
|
|---|
| Protein sequence | MSGIPLIIAF VIAIIIMIVA ISKLKIHPFI SIMTISLLFG IVAGIPLTDI PGVIGTGFSN
TFKSIGIVII LGALIGTLLE KTGAALKMAD CVVRLVGKKN PELAMLIMGW IVSIPVFCDS
GFVILNPIRK ALVKRTMKSS VACTVALSMG LYISHCFIPP TPGPIAAANT LYEGLGQDTN
LLLVMFFGAI CSILPLIVSY FFAKYIGKKV KAMDEADNDG GEIVQTYEEL VASYGKLPSG
FLSFAPIILP IVLMGLSSAL AMAGKSVAVI TFLGTPIIAI AVGVIFGLIL LVSQKKSKEF
NEITNDTLKV TGPILFITAA GGVLGNVIAS TSMVDFIKSN SNALATLGLL FPFLLAAILK
TAQGSSTVAL TTTAGIIAPM LSTIGLATSP LAALTVIAIG AGAMTVSHAN DSYFWVVTNF
GEMKVEDGYK TQTLGTLIMG IAAIINVYIV YLFIR
|
|---|
| |