| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2103 |
|---|
| Symbol | |
|---|
| ID | 5744109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2598670 |
|---|
| End bp | 2599902 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641293198 |
|---|
| Product | hydroxypyruvate reductase |
|---|
| Protein accession | YP_001559208 |
|---|
| Protein GI | 160880240 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2379] Putative glycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATTA GAAATGATGC ACAGCTTATA ATTGATGCAG CGATTAAAGC AGCACTTCCA
GACAATGCAG TAAAAAAAGC TTTAGAGGGA CATGGATTTT CAGACGGCAA GCTACTGCTT
ATAGCAATTG GCAAAGCTGC TTGGTCTATG GCAAAGACCG CTTGTGAAAT ACTTAGTGAC
CGAATTGACG ATGGCGTAGT TATTACAAAG TATGACCACG CGAAAGGAAA TTTGCCTCAT
GTCCGTATCT ATGAAGCAGG GCATCCGGTT CCAGATGCAA ATTCATTCAA AGCTACTGAA
GAAGCAATCA AGCTAGTACA AGGACTAACA TCTGAGGATA CAGTGCTATT TCTCATCTCT
GGCGGTGGTT CGGCACTATT TGAAAAGCCT TTGATTCCTA ATGAAATGCT TGAGAACTTA
ACAAAAGAAT TACTTGCCAG TGGTGCTAAT ATTGTCGAAA TGAATACCAT ACGGAAACGT
TTATCTGCTG TTAAAGGTGG TAAATTCGCA AAGTTATGTG AGCCAGCTAA GGTGTTTTCC
GTTGTATTAT CGGATATTAT TGGGGACCCA CTAGATATGA TTGCATCAGG ACCAGCTTAT
CCGGATAATT CCACTTCTGA ACAAGCAAGA GAGATTTTAA AAAGATATGG ATTAACGGTT
TCAAAGGAAA TCAATGAATT ATTAAGTATA GAACCTATTC ATGAATTAAA TAATGTTACA
ACAGAAATTA CAGGAAGTGT ATCACAACTT TGTGAAGCTG CAAAAAGAAA ATGTGAGGAA
TTAGGTTATG AACCAATTGT ATTAACTAGC AGTCTTAGCT GTGAGGCTAG GGAGGCCGGT
AGTTTTCTCG CTTCTATCGC ACAGCATTAT AATAATACAG AAAAATCTCT CGCCTTTATT
GCCGGCGGTG AAACAGTTGT TCATCTAAAA GGCAATGGAT TAGGTGGTAG AAATCAAGAA
TTAGTATTAG CATCTGCAGT GGGAATTGCT GGTTTGCAGG ATGTTGCGAT ATTTTCCATA
GGTTCTGATG GTACCGATGG ACCTACGGAT GCTGCAGGGG GTTATGTTGA TACTAATACA
CAGAGAGCAC TTGAAGAAAG AGGGATATCA ATATTTGATA CCCTAGAACA GAATAATGCT
TATTATGCAT TACAAGCATG CGATGGATTA ATTATGACGG GTCCTACGGG TACGAATGTG
AATGATTTAT CTGTGCTGCT GATAAAAAGA TAA
|
|---|
| Protein sequence | MNIRNDAQLI IDAAIKAALP DNAVKKALEG HGFSDGKLLL IAIGKAAWSM AKTACEILSD
RIDDGVVITK YDHAKGNLPH VRIYEAGHPV PDANSFKATE EAIKLVQGLT SEDTVLFLIS
GGGSALFEKP LIPNEMLENL TKELLASGAN IVEMNTIRKR LSAVKGGKFA KLCEPAKVFS
VVLSDIIGDP LDMIASGPAY PDNSTSEQAR EILKRYGLTV SKEINELLSI EPIHELNNVT
TEITGSVSQL CEAAKRKCEE LGYEPIVLTS SLSCEAREAG SFLASIAQHY NNTEKSLAFI
AGGETVVHLK GNGLGGRNQE LVLASAVGIA GLQDVAIFSI GSDGTDGPTD AAGGYVDTNT
QRALEERGIS IFDTLEQNNA YYALQACDGL IMTGPTGTNV NDLSVLLIKR
|
|---|
| |