Gene Cphy_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2085 
Symbol 
ID5744091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2574440 
End bp2576149 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content35% 
IMG OID641293182 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001559192 
Protein GI160880224 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTGC TGAATAAAAA AATTTTATCA ATATGTAGAA GAGGACTAAC TATTGTTAAG 
TCAGTTTTCA GATCCAAGGG AAAATTAAAG AATCTCACTT ATGGAGAGAA ATCTATGGTT
GAGGTATTTA ATATTCCAAA CTATACCTTA GAACAAAAGT TATTAGAATC TGGAAAACCA
ATGACTAGTG ATACAACAAG GCAAGAGCTA TTTGGTTTTC AGAGTGATTT AATGGTGGAT
GATCAGATTA TTTCGGATTA TATGCGAGAT GAAGTAATAG ATTTTAGTGG TGGAAATTAT
ACTGCTATGG AAGGCATTAT TACTTTCCGT GGAAATAATT ACCGTAATAG TGCAGTATTT
GGTACTGCTC ATATTGTTGA TAAAAAATTT GATCGTTCCA AGACATGGAA TATTGACACA
GGTAAGTTAA AGAAAACAGT ATCCAGCAAA GGTTATTGGC TAGGAAGCTG TTGGACTGGA
CAACCTCTGA TTGTTCGCTG GAAAGATGAG ACACGCAAAG AGATGAACAT GTATGAGGAT
AAAAAGAACA AAGAAGGACT TGTCGAAGTT ATCTATTCCA CAGCGGATGG TTACATTTAC
TTTTTAGATT TAGATGATGG TAAGCCAACG AGAGATAAGA TATATCTTGG ATTTCCAATC
AAAGGAACCG GAAGTATATA TCCGTCTGAA GTTCCTCTTT ATTTTGCAGG AGCTGGTGAC
TCTATGGGAG AAGACTGTGC AAGAACCTTT ATCGTAGACT TAATTCAGGG CAAAGTAATC
TATGAATATG GTTATGACGA TGAATTTTCT TTAAGAACTG ACAACAATAA ATTTCATGGT
TACGATTCTT CTCCGCTTAT CGATGTTGCA ACTGATACAG TAATACAGCC AGGTGAGAAT
GGAATTATAT ATACTATGAA GCTCAATACA CAGTATGATG GTAAGAGTGT TTCCATTAAC
CCAGAGAAAC CAGTGAAATG GCGTTACACT ACAGATAGAA GTAGAGATGA CCACTATTGG
CTTGGTATGG AGTCTTCTGC GTCAATTTGG AAAGGATTCT TATACATTAC AGATAATTGT
GGTGACATGT TTTGTATTGA TTTAAATACA ATGGAAGTCG TCTGGGTACA AGATACACTA
GATGATACTA ACGCATCTCC AGTATTAGAA GAAAGTATGG AAGATGGAAC AGCATATCTA
TATATATCAA CCTCTCTTCA TTTTACAGCA AATGAAAAGC AAGAAGGTGA TATTCCTCTT
TTAAAAGTGA ACGCTGCTAC CGGAGAAATT GTTTGGAAAC GTAGTTATCC ATGTAAAACA
GTTGCTGGTG TATCTGGTGG TGTACAAGCA ACAGCTTTAT TAGGAGATAA AAAGTTATCT
GGCCTTGTTT ATTTTGTAGT CGCTAGAACC GGTGGAAAAG ATTCTGGAAA ATTAGTTGCA
CTTAATAAAT ATACGGGTGA AACCGTATGG AGTGTTGATA TGACAAATTA CGGTTGGTCT
AGCCCAATTG CACTATATGA TAAAGATGAG AATGGATATG TAATCCTTTG TGATTCTACA
GGAAATATGT ATATGGTGGA TGGCTTATCA GGAAAATTAT ATGATACGAT TAATTTAGGT
AAAATTATTG AGGCTTCACC TGCTGCCTTT GATAATACAA TCGTTGTTGG TACCAAAGGA
CAAAAAATAT ATGGTATTAC TGTAAAATAA
 
Protein sequence
MRVLNKKILS ICRRGLTIVK SVFRSKGKLK NLTYGEKSMV EVFNIPNYTL EQKLLESGKP 
MTSDTTRQEL FGFQSDLMVD DQIISDYMRD EVIDFSGGNY TAMEGIITFR GNNYRNSAVF
GTAHIVDKKF DRSKTWNIDT GKLKKTVSSK GYWLGSCWTG QPLIVRWKDE TRKEMNMYED
KKNKEGLVEV IYSTADGYIY FLDLDDGKPT RDKIYLGFPI KGTGSIYPSE VPLYFAGAGD
SMGEDCARTF IVDLIQGKVI YEYGYDDEFS LRTDNNKFHG YDSSPLIDVA TDTVIQPGEN
GIIYTMKLNT QYDGKSVSIN PEKPVKWRYT TDRSRDDHYW LGMESSASIW KGFLYITDNC
GDMFCIDLNT MEVVWVQDTL DDTNASPVLE ESMEDGTAYL YISTSLHFTA NEKQEGDIPL
LKVNAATGEI VWKRSYPCKT VAGVSGGVQA TALLGDKKLS GLVYFVVART GGKDSGKLVA
LNKYTGETVW SVDMTNYGWS SPIALYDKDE NGYVILCDST GNMYMVDGLS GKLYDTINLG
KIIEASPAAF DNTIVVGTKG QKIYGITVK