Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2080 |
Symbol | |
ID | 5744086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2566265 |
End bp | 2567089 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293177 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001559187 |
Protein GI | 160880219 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000802973 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TACTAAAGAT GTTGGCAGTG TGCATGGTAT TTGTTATGCT AGTAGGCTGT TCAAAGTCTT CAGGGGAACC GGAGAAAGTA AATCCAAATG ACCAAAATCA AAGTAACGGA AATGGAACTG AAGATGGCAA TAACCAAAAA GGTGAGGAAG GAACTAACCC AGGAAACTTA CCAGAAGGCG ACTTAGCAGA AGATGTTATT TTAGTATTAG ATCCAGGACA TGGTGGTGTT TTTGGAGGCG CATCTTATGA TGGAAGAAAC GAGAAGGATT TAACACTAAA AGTTGCAAAC TATGTGAAGG AATACTTAGA AGAAAATTAT GACGGTGTTC AAATTGTGCT CACCCGTACT GAGGATGTTA CTTTGTCCAA TGATGTAAAG GAAGATTTAG AGCTAAGAGC ACAGATAGCA AAAGATGCGA ATGCAGATGC CCTTGTAAGT TTACACTTTA ATGCTTCTGA TGCGCACAAT CAAAATGGCT CTATGGTATT TATATCACAT CGTGATAATG TAACTAATGT ATCTAAATTG CTTGCTGAAT CTATCCTTAC TGAATTAGAA GGACTTGGAT TAAAAAATCA TGGTACAGTA ACAAGAAACA GTAATGATAC GTTTGATGAG AAAGGAAAAC CTCTCGATTA CTATGCAATT AACAGACATT GTGCCAATCG AGACATTCCA GGAATCATTG TAGAGCACTG TTTTATGGAT CATAGTAACG ATAAGAGTTA TATTGATAGC GATGATGCTT TAAAAGCACT TGCGAAAGCG GATGCAGAAG GTATTGCAAA ATTTTATGGA TTGATTAAGA AATAA
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Protein sequence | MKKILKMLAV CMVFVMLVGC SKSSGEPEKV NPNDQNQSNG NGTEDGNNQK GEEGTNPGNL PEGDLAEDVI LVLDPGHGGV FGGASYDGRN EKDLTLKVAN YVKEYLEENY DGVQIVLTRT EDVTLSNDVK EDLELRAQIA KDANADALVS LHFNASDAHN QNGSMVFISH RDNVTNVSKL LAESILTELE GLGLKNHGTV TRNSNDTFDE KGKPLDYYAI NRHCANRDIP GIIVEHCFMD HSNDKSYIDS DDALKALAKA DAEGIAKFYG LIKK
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