Gene Cphy_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2080 
Symbol 
ID5744086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2566265 
End bp2567089 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID641293177 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001559187 
Protein GI160880219 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000802973 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACTAAAGAT GTTGGCAGTG TGCATGGTAT TTGTTATGCT AGTAGGCTGT 
TCAAAGTCTT CAGGGGAACC GGAGAAAGTA AATCCAAATG ACCAAAATCA AAGTAACGGA
AATGGAACTG AAGATGGCAA TAACCAAAAA GGTGAGGAAG GAACTAACCC AGGAAACTTA
CCAGAAGGCG ACTTAGCAGA AGATGTTATT TTAGTATTAG ATCCAGGACA TGGTGGTGTT
TTTGGAGGCG CATCTTATGA TGGAAGAAAC GAGAAGGATT TAACACTAAA AGTTGCAAAC
TATGTGAAGG AATACTTAGA AGAAAATTAT GACGGTGTTC AAATTGTGCT CACCCGTACT
GAGGATGTTA CTTTGTCCAA TGATGTAAAG GAAGATTTAG AGCTAAGAGC ACAGATAGCA
AAAGATGCGA ATGCAGATGC CCTTGTAAGT TTACACTTTA ATGCTTCTGA TGCGCACAAT
CAAAATGGCT CTATGGTATT TATATCACAT CGTGATAATG TAACTAATGT ATCTAAATTG
CTTGCTGAAT CTATCCTTAC TGAATTAGAA GGACTTGGAT TAAAAAATCA TGGTACAGTA
ACAAGAAACA GTAATGATAC GTTTGATGAG AAAGGAAAAC CTCTCGATTA CTATGCAATT
AACAGACATT GTGCCAATCG AGACATTCCA GGAATCATTG TAGAGCACTG TTTTATGGAT
CATAGTAACG ATAAGAGTTA TATTGATAGC GATGATGCTT TAAAAGCACT TGCGAAAGCG
GATGCAGAAG GTATTGCAAA ATTTTATGGA TTGATTAAGA AATAA
 
Protein sequence
MKKILKMLAV CMVFVMLVGC SKSSGEPEKV NPNDQNQSNG NGTEDGNNQK GEEGTNPGNL 
PEGDLAEDVI LVLDPGHGGV FGGASYDGRN EKDLTLKVAN YVKEYLEENY DGVQIVLTRT
EDVTLSNDVK EDLELRAQIA KDANADALVS LHFNASDAHN QNGSMVFISH RDNVTNVSKL
LAESILTELE GLGLKNHGTV TRNSNDTFDE KGKPLDYYAI NRHCANRDIP GIIVEHCFMD
HSNDKSYIDS DDALKALAKA DAEGIAKFYG LIKK