| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2060 |
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| Symbol | |
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| ID | 5743760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2544977 |
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| End bp | 2546347 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641293157 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001559167 |
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| Protein GI | 160880199 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000022927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACG AGACAACTAT GGAACAAAAC AAGATGGGGG TAATGAAAGA GAATAAATTA
CTTATTACTA TGTCCTTACC TATTATGGTC TCTATGTTAG TACAAGCAAT GTATAACGTT
GTAGATAGTT TGTTTGTTGC TAGATTGAAT GAAGATGCAT TAACAGCTGT TTCGCTAGCC
TTTCCAATAC AAAATTTAAT CATAGCAATA GGTGTTGGTA CCGCAGTCGG TATTAACTCT
TTATTATCCC GTTATCTCGG GGAAAGAAAT CAGGAAAAAG TGAATAAAGT AGCAAATAAT
GGTGTGTTTA TCACTGCAGT TAGCTATATA TTCTTTCTTA TCTTTGGTCT CTTTTTTACA
AGAATATTTT TTACTACTCA GACAGATAAT CAACAGATTA TTGAATACGG AGTTTCCTAT
TTATCTATTT GTACCATCTT TTCTTTTGGA GTGTTAGGAC AGATAACATT TGAACGATTA
TTACAATCAA CTGGTAGGAC TGTGTATTCG ATGTATTCTC AGGCTGCAGG AGCAATAATC
AACATCATTC TCGACCCAAT CCTCATTTTT GGTCTATTGG GAGCTCCAAA GCTAGGAGTT
GCCGGAGCGG CGATTGCAAC TGTTATTGGT CAGATTTGTG GCTTTAGTAT AGGAGTTTAT
TTAAATCATA AATTTAATCA CGATATTCAT TTGAATATAA AGAAGTTTAA ACCAGACGGT
CATATTATTA GACAAATATA TCAAGTAGGT TTTCCTGCTA TTATCATGCA ATCCATAGTT
TCTGTTATGA TATTTGTTTT AAATAAAATT TTAATATCAT TTTCTTCAAC ATCAGCAGCT
GTTTTAGGTA TTTATTCTAA ACTACAGAGT TTCGTATTTA TGCCTGTATT TGGATTAAAT
AATGGTATGA TTCCAATTAT CGCTTACAAT TACGGTGCAA AAATGCCAAA GCGTATTGTT
AAGATTATTA AATTAAGTTT TGTTTATGCG ATAGGAATTA TGTTAGTTGG ATTTGTGCTT
ATGGAAATAG CACCACGTGA ATTTCTCTCA TTCTTTCAGG CGTCGGAAGA TATGATGGGA
ATAGGGGTAG TAGCACTTCG TGTTATCAGT ATAAGTTTCT TATTTGCCGG ATTTAACATT
GTATCAAGTT CTGTGTATCA AGCTCTTGGT AATGGAGTAC TGAGTTTAGT TATCTCTATA
ATTCGTCAAT TGGTTGTTCT TCTACCAGTT GCCTACATCT TATCAAAACA AGGAATCCAT
GCAATATGGT GGGCTTTCCC GATTGCAGAA CTAGTAGCAG TAGTTTTAAA TTTAATTTTC
TTAAAGTATG TGTACAAAAA GGAGATTAAG CCTTTACAGT TTGTAAAATA A
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| Protein sequence | MENETTMEQN KMGVMKENKL LITMSLPIMV SMLVQAMYNV VDSLFVARLN EDALTAVSLA
FPIQNLIIAI GVGTAVGINS LLSRYLGERN QEKVNKVANN GVFITAVSYI FFLIFGLFFT
RIFFTTQTDN QQIIEYGVSY LSICTIFSFG VLGQITFERL LQSTGRTVYS MYSQAAGAII
NIILDPILIF GLLGAPKLGV AGAAIATVIG QICGFSIGVY LNHKFNHDIH LNIKKFKPDG
HIIRQIYQVG FPAIIMQSIV SVMIFVLNKI LISFSSTSAA VLGIYSKLQS FVFMPVFGLN
NGMIPIIAYN YGAKMPKRIV KIIKLSFVYA IGIMLVGFVL MEIAPREFLS FFQASEDMMG
IGVVALRVIS ISFLFAGFNI VSSSVYQALG NGVLSLVISI IRQLVVLLPV AYILSKQGIH
AIWWAFPIAE LVAVVLNLIF LKYVYKKEIK PLQFVK
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