Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2037 |
Symbol | |
ID | 5743065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2517465 |
End bp | 2518424 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641293134 |
Product | inner-membrane translocator |
Protein accession | YP_001559144 |
Protein GI | 160880176 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.249578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTAA TAATTATAGA CGGGTTATCC TTTGCATTAC CATTATTTAT TATGGCAATT GGCGGAATCT ATTGTGAAAA GAGTGGAATA ACAAATCTTG CATTAGAAGG TCTACAAGGA TTTGGTGCAT TTTGTGGAGC ATTTGCAGCT GTTCTAGCAA TGCGAGCCCT TGGAACAGAT TCCTCTGTAC CATTCTATCT TGCATTATTT ATAGCCATGC TTGGTGGTAT GGTATTTTCC TTAATCCATG CACTTTTATG TATTCGTTTT AAAGCAAATC AAGTAATTAG TGGTGTTGTA ATTAATATTT TAGCATTATC CTTAACTACC TTTTTAACAA AACAGATTAA TCGTGGATTA TTTAATGCAC CTTCGGATAA GTTCGTATTA GGTGTTTCTA ATAAACTTAC GATACCTGTT TTATCAGAGA TACCTGTAAT CGGGGCAATA TTTAAAAACA TATACCCTTT TCAAATTGTT ATCATTGTAA TTGCATTTAT AGCTTGGTAT ATTCTATATA AAACAAGATT TGGATTGCAT GTAAGAGCGT GTGGGGAAAA TCCTCATGCT GTCGATGCAG CAGGAATCTC GGTAGCAAAG ACTCGTCTAG TTGCAGTTAT CGTATCTGGT GCATTGTCTG GATTAGCTGG TATTAGTTTT GCATATTCTA TCTCTGCAAA CTTTTCTGGT AGTATTTACA CTGGATATGG TTACCTTGCT ATCGCGGGAT TAATCTTTGG AAACTGGTCA ATCCTTCCGA CATTAGGAGC TTGTCTGTTA TTTGGTTTTG CAAGATCTGG TGGGTATCAG CTTGTCCAGA TATTAGAATT ACCAAGTGCC TACTCAGACC TAGTTATGAT TTTACCTTAT GCATTAACAA TGCTTTTACT TGTATTTTTC TCTAAGCATA ATCGTGCACC ATCTGCACTT GGTGAAATTT ACGATAAAGG AAAACGTTAG
|
Protein sequence | MELIIIDGLS FALPLFIMAI GGIYCEKSGI TNLALEGLQG FGAFCGAFAA VLAMRALGTD SSVPFYLALF IAMLGGMVFS LIHALLCIRF KANQVISGVV INILALSLTT FLTKQINRGL FNAPSDKFVL GVSNKLTIPV LSEIPVIGAI FKNIYPFQIV IIVIAFIAWY ILYKTRFGLH VRACGENPHA VDAAGISVAK TRLVAVIVSG ALSGLAGISF AYSISANFSG SIYTGYGYLA IAGLIFGNWS ILPTLGACLL FGFARSGGYQ LVQILELPSA YSDLVMILPY ALTMLLLVFF SKHNRAPSAL GEIYDKGKR
|
| |