Gene Cphy_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2036 
Symbol 
ID5743064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2516263 
End bp2517474 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content35% 
IMG OID641293133 
Productinner-membrane translocator 
Protein accessionYP_001559143 
Protein GI160880175 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA AATTAAAAAA CAGTAAAGTT CAAGCCATTA TGGTTCCTAT CATTGCGATT 
ATTGTTAGCT TACTAGTAGG AGCAGTTGTA TTACTTGGCC TAGGTAAGAA TCCTATCAGT
GTTTATTATA ATATTTTACA AGGTGCCGGT ATACTTCCAA AGCCTTCTTA TGCAGGGTAT
AAAGGATTGA TTACGGATTT CTTTAGCTTA CTTAACATGT GGACACCTAT GCTATTTGCT
TCCCTTGCGG TTGCAGTGGC GTTAAAGGCA GGGTTATTTA ATATAGGTGT TGCGGGTCAG
ATGTTAACTG CTGGTTTTGT TAGTACCATA GTGGTTGGGT ATAGCTCACT TAATGATTTT
CTTGCAAAAC CTCTCGTTAT TTTAATTAGT ATTCTTACGG GAGCATTGGT TGGCGGATTG
ATTGGATGGT TGAAACACCG TTATAATATC AATGAGGTTG TATCCTCCAT TATGATTAAC
TATATCGCCC AATATGTGAT TAGTTTCTTT ATTACTATGT ACTATATTAA TCCTGTATCC
AGACAATCAA ATCCAGTAAG TAAAGCAGCA AGATTAACCT TAGTGGATAT GAAAATAGGA
AATTATAAGA TGGATATTCC GCTTTCTATA ATCCTAGCGA TTATACTAGT TTTCGTTGTT
AGGTTTTTAC TGAATCGTAC CAAAGTTGGT TTTGAGCTAA AAGCAATTGG CGAAAGTAAA
AATACTGCAA AATACGCTGG TATGAATGTG GGTAAAAATA TGGTATTAGC TATGGCAATC
TCAGGTGCAT TAGCCGGACT AGCTGGTGTT ACTTACTATC TAGGATACTT TGGATCGATT
CAACCGAAGG TGTTACCTAG TATAGGATTT GATTCTATTG CAGTAGCACT ACTTGGTAAT
TCGAATCCTG TTGGTATCTT ATTCTCTTCC TTATTAATTT CTATTATTAA TAAAGGTAGC
ACATATATGA GTTCCGCTGC CGGTGTAGAA GCTGAAATTG CTTCTGTTAT TACTGGAATT
ATACTTCTAT TTTCAGCTTG CAGTTTTTAT ATTAGACATA AGATTGATAG AATAAGTTCA
AAATCAGAAG AGAAGAAGAG CGAAACTCTT ACAGAATTGC AAGATATAAG ATCTAGTTTT
CATAAAGAGG GAAAACAAGA AGAGAAAAAA ATAGAATCAA CCGAAGTAAA GGAGGATAAC
AAATGGAATT AA
 
Protein sequence
MRNKLKNSKV QAIMVPIIAI IVSLLVGAVV LLGLGKNPIS VYYNILQGAG ILPKPSYAGY 
KGLITDFFSL LNMWTPMLFA SLAVAVALKA GLFNIGVAGQ MLTAGFVSTI VVGYSSLNDF
LAKPLVILIS ILTGALVGGL IGWLKHRYNI NEVVSSIMIN YIAQYVISFF ITMYYINPVS
RQSNPVSKAA RLTLVDMKIG NYKMDIPLSI ILAIILVFVV RFLLNRTKVG FELKAIGESK
NTAKYAGMNV GKNMVLAMAI SGALAGLAGV TYYLGYFGSI QPKVLPSIGF DSIAVALLGN
SNPVGILFSS LLISIINKGS TYMSSAAGVE AEIASVITGI ILLFSACSFY IRHKIDRISS
KSEEKKSETL TELQDIRSSF HKEGKQEEKK IESTEVKEDN KWN