Gene Cphy_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2022 
Symbol 
ID5743050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2496351 
End bp2497169 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content33% 
IMG OID641293119 
Product8-oxoguanine DNA glycosylase domain-containing protein 
Protein accessionYP_001559129 
Protein GI160880161 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID[TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAAA TTACAGTAGA AAATTTTGAT ATACGCAAGA TTTGTTATTC TGGGCAATGT 
TTCCGTATGA AGGAAATTAG TGAAACTTCA TATGAAGTTG TAGCATATGG GCATTACTTA
AGAATCAGCC AGCAAGACAA TGAATTGACA TTTTCTTGTA CGGAAGGAGA GTTTCATTCA
ATTTGGAATG AATATTTGGG ATTGAATGTT GATTATGATA CCATAACCGG ACTTGTAAAT
GAAGATGATC GATATATGAA GTCAGCGATG TCTTTTGGTT GGGGAATTCG TATACTGAAA
CAAGAGCTAT GGGAAACAAT TGTTTCTTTC TTAATTTCAC AGCAAAACAA CATTCCAAGG
ATAAAGAAAA GTATTCAAAT GCTCTGTGAA CGTTATGGTG ATGAGAAATT AAATGAGAAT
GGCGATGTAT ATTACACATT TCCAAAACCT GAAGCATTCT TAAATTTAAA AGATAGTGAA
CTAAAAGAAT GTAATTTGGG TTATCGTACG AAATATATTC TCAGAACTGC AAAAGCAGTT
GTAGATGGTA GTTTTGATTT AGAAGGTTTA CCAAATCTAA GTTATGAAGA TGCGAAAAAA
GAACTGATGA AATTATATGG TGTTGGTATC AAGGTTTCAG AATGTATCTG TTTATATGCT
CTACATCACT TTGATGCTTT TCCAATTGAT ACACATATTC AAAAGGTATT GGAATTAAAT
TATCCTGGTG GATTCCCTTT TGATAAGTAT CGAGGGTATT CGGGAGCATT GCAACAATAT
GCATTTTATT ATGATTTGAA TGAGGCGAAG ATAGGGTAA
 
Protein sequence
MYQITVENFD IRKICYSGQC FRMKEISETS YEVVAYGHYL RISQQDNELT FSCTEGEFHS 
IWNEYLGLNV DYDTITGLVN EDDRYMKSAM SFGWGIRILK QELWETIVSF LISQQNNIPR
IKKSIQMLCE RYGDEKLNEN GDVYYTFPKP EAFLNLKDSE LKECNLGYRT KYILRTAKAV
VDGSFDLEGL PNLSYEDAKK ELMKLYGVGI KVSECICLYA LHHFDAFPID THIQKVLELN
YPGGFPFDKY RGYSGALQQY AFYYDLNEAK IG