| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2012 |
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| Symbol | |
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| ID | 5743040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2484588 |
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| End bp | 2485658 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293109 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001559119 |
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| Protein GI | 160880151 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAA AAAAAGTTAT CGCGATTTCC TTGACGGCAG TTATGATGTT AGGTCTACTG
TCTGGGTGTA AGAAGGAGGA TTCTAATGAC AAAGCTACAA GCGGTTCCGG TAAAGAAATG
ACGGTTGAAA TTGTAGCAAA AGGTTTCCAA CATGACTTTT GGCAAGCAGT ATTAGCAGGA
AGTAAGAAAG CAGAAAAAGA ATTCAATGTT AAAACAAATT TCGTGGGTCC AGAGGGTGAA
GGTGCAATTG CAACGCAAGT AGAACAGATT AACAATGCAA TTAATAAAAA ACCTTCTGCA
ATATGTCTTG CAGCTCTTGA TACAAATGCA GCTTTAGATG CACTTAGTCA AGCTAAGTCA
CAAGGTATTC CAATCATTGG TTTTGACTCT GGTGTACCAG GTGCACCAGA AGGTTCTGTA
AAGGCAAATG CAGCAACAGA TAATTATGCA GCTGGTGAAT TAGCAGCTAC AAAAATGTAC
GAAGCAATTA AAGATAAGGT AACTAATCCA TCCAATGTTG TTCGTATTGG TGTAGTGTCC
CAAGAAGCTA ACTCTGATTC CATCATCAAA CGTACATCAG GTTTTGTTGA CAAGATGAGT
TCTTTAATTG GTGAAAATAA CTCCTGCGTA GAAGGTCATG ATAAGTATAA TCGTAAATCA
GATGGTGCGA AAGTTATCAT TGAAGTGCGT ATTCCAGCAG AAGTTACTGA TAACGCAGGT
AAGACAGAAG CATTAACATT ATTAAACAAA GAAGACTTAG TTGCTATTTA TGGATCTAAT
GAATTTGCAG CAAAATGTAT TATTAACGCA AATGAAGGTT TAAATAAGCT TGGTGAAGGT
AAAGTTATCG CAGTTGGTTT TGACTCTGGT GCACTTCAGA TTGATGCTAT TAAGAATAAG
GTATTCTATG GTTCTGTTAC ACAAGATCCA GTTTCCATTG GATATAATGC AGTACGTTTA
GCTGTTGCAG CAGCAAAGGG TCAGAAAGTA GAAGATGTGG ATACTGGTTG TCAGTGGTAT
AATTCAGAAA ATTATAATTC AGCCGATATT GCACCTTGTT TATATCAGTA A
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| Protein sequence | MRAKKVIAIS LTAVMMLGLL SGCKKEDSND KATSGSGKEM TVEIVAKGFQ HDFWQAVLAG
SKKAEKEFNV KTNFVGPEGE GAIATQVEQI NNAINKKPSA ICLAALDTNA ALDALSQAKS
QGIPIIGFDS GVPGAPEGSV KANAATDNYA AGELAATKMY EAIKDKVTNP SNVVRIGVVS
QEANSDSIIK RTSGFVDKMS SLIGENNSCV EGHDKYNRKS DGAKVIIEVR IPAEVTDNAG
KTEALTLLNK EDLVAIYGSN EFAAKCIINA NEGLNKLGEG KVIAVGFDSG ALQIDAIKNK
VFYGSVTQDP VSIGYNAVRL AVAAAKGQKV EDVDTGCQWY NSENYNSADI APCLYQ
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