| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2001 |
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| Symbol | |
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| ID | 5743029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2469662 |
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| End bp | 2471206 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641293098 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001559108 |
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| Protein GI | 160880140 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0167205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA ATGAAATGAA TTTAATAAAA CCGTTGTTGC AAGCCATCAA GGAAGAAGGA
TTTATAGAGC CATCACCGAT TCAAAAAAAG ACGATTCCCC TAGTACTTGA AGGTAGAGAT
ATCCTAGGAT GTGCCCAGAC GGGAACTGGT AAGACAGCAG CATTTGCATT ACCTATTTTA
CAGAGTTTAT CGAAAGGTGA GGGCAGTGGA GTCCGTGCCC TTATTATTAC ACCAACGAGG
GAATTGGCGA TTCAGATATA TGAAAGTTTT GAGTGTTTTG GTAAGTATAC GTCGCTTAAG
CAAAGTGTTA TTTACGGTGG AGTAGGACAA AGTTTACAAG TTAATTCTTT AAAAGCGGGA
ATAGATATTC TAATAGCAAC GCCTGGTCGA CTTAATGATT TGATTGGACA AGGTTATATT
ACGTTAGATG CAATCGAGAT GTTTGTACTA GATGAAGCAG ATCAAATGCT TGATATGGGT
TTTTTAAATG ATATAAAAAA GGTGATAAAA TTATTACCGA AGACACGACA GACATTACTG
TTTAGTGCGA CGATGCCAAA GGAAATTGAA TCACTAGCAA CTAATTTACT AAACAATCCT
GAAATAATTA AAATTAGTCC GGTAACAAGT ACGGTCGATT CCATCGAACA AAGTGTTTAT
TTTGTTGATC GTTTAAATAA AATCTCATTA TTAACATCAT TGATCAAAGA GCATAAGATG
TCAAGGGTTC TTGTATTTAC TAAAACAAAA CATGGTGCTG ATCGTGTGGC AGATAAGTTA
AACAAGGCAA AAGTTAAGAC ACAAGCAATT CATGGTGGTA AAGGTCAGAA TGCAAGGCAG
ACTGCACTTA GTGATTTTAA AGAGGGAAAA ATCAAAGTAT TGGTTGCAAC TGACATCGCT
GCAAGAGGTA TTGATATTTC AGAGTTATCC TATGTGGTAA ATTACGATAT CCCAAATCAA
GCAGAAATTT ACATTCATCG TATCGGAAGA ACAGGACGCG CCGGATTAGG TGGAAATGCA
ATCAATTTAT GTAATATTGA CGATATGGAT TATTTAAGAG AAATTGAAAA ACATATTGGT
ATGGTTATTC CAGAGGTTCC CTCCAAGTGG CCGATGTTAA TACTTGAGAA GACGGAAAAG
CCAGTCAGAG GTCAAAGGCC AGAAAATACT ACAAAGAATG TAGGCAAGGA ATCTGTTAAG
ACGGAAGAAA AGATTTTGCT AAACGAAGGA GCAAAGAAAA CGAAAGCTCA CAAGAAGCCT
GTATATAAAA CGGGAGAGGA AAGTAAAAAA ATGTCCTCTA CTAAGAAGAA AGGGTCTGCA
ATAGGTAATA AGAATACAGT TGCAGGTAAG AAGCAGCAAT TACAAGAAAA GAATAGCACT
GTAATAGAAA AGAAAAAAAC TGTTATCGAT AAAAAGAAAA CTGTTATTGA TAAAAAGAAA
ACTGTCATTG ATAAAAGGAA AACTGTTATT GATAAGAAGA ACGCTGTTAT TGACAATAAG
AAATCTGTTA TTGGAAAGAA AAAACACAAG TCTATCTCAA TGTAA
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| Protein sequence | MNFNEMNLIK PLLQAIKEEG FIEPSPIQKK TIPLVLEGRD ILGCAQTGTG KTAAFALPIL
QSLSKGEGSG VRALIITPTR ELAIQIYESF ECFGKYTSLK QSVIYGGVGQ SLQVNSLKAG
IDILIATPGR LNDLIGQGYI TLDAIEMFVL DEADQMLDMG FLNDIKKVIK LLPKTRQTLL
FSATMPKEIE SLATNLLNNP EIIKISPVTS TVDSIEQSVY FVDRLNKISL LTSLIKEHKM
SRVLVFTKTK HGADRVADKL NKAKVKTQAI HGGKGQNARQ TALSDFKEGK IKVLVATDIA
ARGIDISELS YVVNYDIPNQ AEIYIHRIGR TGRAGLGGNA INLCNIDDMD YLREIEKHIG
MVIPEVPSKW PMLILEKTEK PVRGQRPENT TKNVGKESVK TEEKILLNEG AKKTKAHKKP
VYKTGEESKK MSSTKKKGSA IGNKNTVAGK KQQLQEKNST VIEKKKTVID KKKTVIDKKK
TVIDKRKTVI DKKNAVIDNK KSVIGKKKHK SISM
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